RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 GPT2Q8TD30 523 aa14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 KRT18P05783 430 aaKnown RBP14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 C17orf53Q8N3J3 647 aaPredicted RBP14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 SSH3Q8TE77 659 aa14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 TMX1Q9H3N1 280 aa14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 TCEAL9Q9UHQ7 104 aa14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 DNAI1Q9UI46 699 aa14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 V9GYY5 206 aaPredicted RBP14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 ZBTB43O43298 467 aa14.68□□□□□ -0.06
DNMT3A-204ENST00000380756 PRC1O43663 620 aa14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 CCDC148Q8NFR7 591 aa14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 LGR6Q9HBX8 967 aa14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 GCP02774 474 aa14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 IKQ13123 557 aaPredicted RBP14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 IQCEQ6IPM2 695 aa14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 TRPM1Q7Z4N2 1603 aa14.67□□□□□ -0.06
DNMT3A-204ENST00000380756 PLEKHG3A1L390 1219 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 SLU7O95391 586 aaKnown RBP14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 ADAMTS2O95450 1211 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 ATP2B3Q16720 1220 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 TM6SF1Q9BZW5 370 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 ZNF500O60304 480 aaPredicted RBP14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 KCNA6P17658 529 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 HSP90AA4PQ58FG1 418 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 MFSD6Q6ZSS7 791 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 KLHDC4Q8TBB5 520 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 TBX22Q9Y458 520 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 FAM193AP78312 1265 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 TXLNBQ8N3L3 684 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 SSH2Q76I76 1423 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 ZNF853P0CG23 659 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 KANK3Q6NY19 840 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 MYRIPQ8NFW9 859 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 CRACR2AQ9BSW2 395 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 ZHX3Q9H4I2 956 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
DNMT3A-204ENST00000380756 SSBP05455 408 aaKnown RBP eCLIP14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 OSBPL3Q9H4L5 887 aa14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 LMTK3Q96Q04 1460 aa14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 NUP88Q99567 741 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 CALCOCO1Q9P1Z2 691 aa14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 ATP2B2Q01814 1243 aa14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 ZSWIM4Q9H7M6 989 aa14.65□□□□□ -0.06
DNMT3A-204ENST00000380756 RNF113AO15541 343 aaKnown RBP14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 FAM160A1Q05DH4 1040 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 ATL3Q6DD88 541 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CATIPQ7Z7H3 387 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CCDC12Q8WUD4 166 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 TEX13AQ9BXU3 409 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 TSPYL1Q9H0U9 437 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CT47A1Q5JQC4 288 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 SLC9C2Q5TAH2 1124 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 IFNKQ9P0W0 207 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CLSTN2Q9H4D0 955 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 CBX8Q9HC52 389 aa14.64□□□□□ -0.07
DNMT3A-204ENST00000380756 IBTKQ9P2D0 1353 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 A0A1B0GVL5 298 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 NLRP5P59047 1200 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 ZNF397Q8NF99 534 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 IL17REQ8NFR9 667 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 ARHGEF10O15013 1369 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 RIOK3O14730 519 aaKnown RBP14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 YEATS4O95619 227 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 EIF4A1P60842 406 aaKnown RBP14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 TIMM10P62072 90 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 BICDL1Q6ZP65 573 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 AATKQ6ZMQ8 1374 aa14.63□□□□□ -0.07
DNMT3A-204ENST00000380756 WTAPQ15007 396 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 SPA17Q15506 151 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 ME3Q16798 604 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 BRAPQ7Z569 592 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 SUCLG2Q96I99 432 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 STAP2Q9UGK3 403 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 TUBB4AP04350 444 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 TNNI3KQ59H18 835 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 FPGT-TNNI3KV9GXZ4 949 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 CDC42BPAQ5VT25 1732 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 GOLGA6L10A6NI86 522 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 MAP9Q49MG5 647 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 MYO6Q9UM54 1294 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 CCDC194A0A1B0GVG4 234 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 PATL2C9JE40 543 aaKnown RBP14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 N4BP3O15049 544 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 ZNF790Q6PG37 636 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 MKNK2Q9HBH9 465 aa14.62□□□□□ -0.07
DNMT3A-204ENST00000380756 UNC5CLQ8IV45 518 aa14.61□□□□□ -0.07
DNMT3A-204ENST00000380756 LLPHQ9BRT6 129 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms