RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MTHFSP49914 203 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 ZNF75DP51815 510 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 SNW1Q13573 536 aaKnown RBP10.85□□□□□ -0.67
PTPRA-204ENST00000380393 CCDC27Q2M243 656 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 CHD1LQ86WJ1 897 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
PTPRA-204ENST00000380393 CABS1Q96KC9 395 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 ADAMTSL3P82987 1691 aa10.85□□□□□ -0.67
PTPRA-204ENST00000380393 PYGLP06737 847 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 IQCA1Q86XH1 822 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.672e-6■■■■■ 71
PTPRA-204ENST00000380393 PICK1Q9NRD5 415 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 UBR1Q8IWV7 1749 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 YTHDC2Q9H6S0 1430 aaKnown RBP10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CCDC144CPQ8IYA2 1237 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CCAR2Q8N163 923 aaKnown RBP10.84□□□□□ -0.67
PTPRA-204ENST00000380393 SYTL4Q96C24 671 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-204ENST00000380393 TCHHQ07283 1943 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 RTN2O75298 545 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CDC45O75419 566 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
PTPRA-204ENST00000380393 SETDB1Q15047 1291 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CCDC158Q5M9N0 1113 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 ZKSCAN4Q969J2 545 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-204ENST00000380393 MAF1Q9H063 256 aa10.84□□□□□ -0.67
PTPRA-204ENST00000380393 CHUKO15111 745 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 NUCB1Q02818 461 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ZRSR2Q15696 482 aaKnown RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 SLC5A9Q2M3M2 681 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 LRRC8AQ8IWT6 810 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 DRAXINQ8NBI3 349 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 EPC1Q9H2F5 836 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 AKAP2Q9Y2D5 859 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ELL2O00472 640 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ERC2O15083 957 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 PECAM1P16284 738 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 MAGEA8P43361 318 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ARID5BQ14865 1188 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 NAA25Q14CX7 972 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 PREPLQ4J6C6 727 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ATF7IPQ6VMQ6 1270 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 CFAP53Q96M91 514 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 FUT8Q9BYC5 575 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 SRGAP3O43295 1099 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 CCDC93Q567U6 631 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 PROCA1Q8NCQ7 364 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 TMX4Q9H1E5 349 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-204ENST00000380393 ACBD3Q9H3P7 528 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 PDE11AQ9HCR9 933 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 AMOTL2Q9Y2J4 779 aa10.83□□□□□ -0.68
PTPRA-204ENST00000380393 TMCO5BA8MYB1 307 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 EXOC5O00471 708 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
PTPRA-204ENST00000380393 HHATQ5VTY9 493 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 KIRREL3Q8IZU9 778 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 C3orf20Q8ND61 904 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 BICC1Q9H694 974 aaKnown RBP10.82□□□□□ -0.68
PTPRA-204ENST00000380393 FAN1Q9Y2M0 1017 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 NEMFO60524 1076 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
PTPRA-204ENST00000380393 EVCP57679 992 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 UBE2HP62256 183 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 ANKLE2Q86XL3 938 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 CNNM3Q8NE01 707 aa10.82□□□□□ -0.68
PTPRA-204ENST00000380393 ADAMTS13Q76LX8 1427 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 KCNA6P17658 529 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 MCM6Q14566 821 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 POTEDQ86YR6 584 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 MYLK4Q86YV6 388 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-204ENST00000380393 CNPY2Q9Y2B0 182 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 IQGAP1P46940 1657 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 INPP5BP32019 993 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 DDR1Q08345 913 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 AATKQ6ZMQ8 1374 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 ROBO2Q9HCK4 1378 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 ENO4A6NNW6 628 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 OATP04181 439 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 ZNF396Q96N95 335 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-204ENST00000380393 CDK19Q9BWU1 502 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 CARD6Q9BX69 1037 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 LMCD1Q9NZU5 365 aa10.81□□□□□ -0.68
PTPRA-204ENST00000380393 MYO3AQ8NEV4 1616 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 TADA3O75528 432 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 PAX3P23760 479 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 PRPHP41219 470 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 CAPN7Q9Y6W3 813 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 FAM169AQ9Y6X4 670 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 CDKL5O76039 1030 aa10.8□□□□□ -0.68
PTPRA-204ENST00000380393 MCM2P49736 904 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms