RNA–Protein interactions for RNA: ENST00000380340.8

APH1B-202, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-202ENST00000380340 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
APH1B-202ENST00000380340 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
APH1B-202ENST00000380340 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 ARMC5Q96C12 935 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 EYA3Q99504 573 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 CEP290O15078 2479 aa13.68□□□□□ -0.22
APH1B-202ENST00000380340 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
APH1B-202ENST00000380340 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
APH1B-202ENST00000380340 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
APH1B-202ENST00000380340 TCIRG1Q13488 830 aa13.67□□□□□ -0.22
APH1B-202ENST00000380340 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
APH1B-202ENST00000380340 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
APH1B-202ENST00000380340 PTPN22Q9Y2R2 807 aa13.67□□□□□ -0.22
APH1B-202ENST00000380340 H0YGN5 161 aa13.66□□□□□ -0.22
APH1B-202ENST00000380340 NF2P35240 595 aa13.66□□□□□ -0.22
APH1B-202ENST00000380340 INHBEP58166 350 aa13.66□□□□□ -0.22
APH1B-202ENST00000380340 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
APH1B-202ENST00000380340 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
APH1B-202ENST00000380340 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
APH1B-202ENST00000380340 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
APH1B-202ENST00000380340 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
APH1B-202ENST00000380340 POLLQ9UGP5 575 aa13.66□□□□□ -0.22
APH1B-202ENST00000380340 ERBB4Q15303 1308 aa13.65□□□□□ -0.22
APH1B-202ENST00000380340 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
APH1B-202ENST00000380340 BRCA2P51587 3418 aa13.65□□□□□ -0.22
APH1B-202ENST00000380340 G3V3G9 751 aa13.65□□□□□ -0.22
APH1B-202ENST00000380340 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
APH1B-202ENST00000380340 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
APH1B-202ENST00000380340 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.22
APH1B-202ENST00000380340 KIAA0100Q14667 2235 aaKnown RBP13.64□□□□□ -0.23
APH1B-202ENST00000380340 LAMB4A4D0S4 1761 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 RBBP6Q7Z6E9 1792 aaKnown RBP13.64□□□□□ -0.23
APH1B-202ENST00000380340 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 MYOZ2Q9NPC6 264 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
APH1B-202ENST00000380340 COL6A3P12111 3177 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
APH1B-202ENST00000380340 EIF4A1P60842 406 aaKnown RBP13.63□□□□□ -0.23
APH1B-202ENST00000380340 GPSM2P81274 684 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 PRAMEF18Q5VWM3 479 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
APH1B-202ENST00000380340 TBC1D16Q8TBP0 767 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 ZNF609O15014 1411 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
APH1B-202ENST00000380340 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
APH1B-202ENST00000380340 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
APH1B-202ENST00000380340 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
APH1B-202ENST00000380340 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
APH1B-202ENST00000380340 ARMC9Q7Z3E5 817 aa13.62□□□□□ -0.23
APH1B-202ENST00000380340 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
APH1B-202ENST00000380340 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
APH1B-202ENST00000380340 EFCC1Q9HA90 598 aa13.62□□□□□ -0.23
APH1B-202ENST00000380340 NBPF11Q86T75 865 aa13.61□□□□□ -0.23
APH1B-202ENST00000380340 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
APH1B-202ENST00000380340 GMLQ99445 158 aa13.61□□□□□ -0.23
APH1B-202ENST00000380340 SCAF8Q9UPN6 1271 aaKnown RBP13.61□□□□□ -0.23
APH1B-202ENST00000380340 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
APH1B-202ENST00000380340 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
APH1B-202ENST00000380340 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
APH1B-202ENST00000380340 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
APH1B-202ENST00000380340 LDLRAD1Q5T700 205 aa13.6□□□□□ -0.23
APH1B-202ENST00000380340 CD99L2Q8TCZ2 262 aa13.6□□□□□ -0.23
APH1B-202ENST00000380340 ZNF333Q96JL9 665 aa13.6□□□□□ -0.23
APH1B-202ENST00000380340 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
APH1B-202ENST00000380340 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
APH1B-202ENST00000380340 LRP10Q7Z4F1 713 aa13.59□□□□□ -0.23
APH1B-202ENST00000380340 SLC10A4Q96EP9 437 aa13.59□□□□□ -0.23
APH1B-202ENST00000380340 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
APH1B-202ENST00000380340 PODXL2Q9NZ53 605 aa13.59□□□□□ -0.23
APH1B-202ENST00000380340 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
APH1B-202ENST00000380340 DDX60Q8IY21 1712 aaKnown RBP13.59□□□□□ -0.23
APH1B-202ENST00000380340 LAMB2P55268 1798 aa13.58□□□□□ -0.23
APH1B-202ENST00000380340 RPS8P62241 208 aaKnown RBP13.58□□□□□ -0.24
APH1B-202ENST00000380340 SP3Q02447 781 aa13.58□□□□□ -0.24
APH1B-202ENST00000380340 ARHGEF6Q15052 776 aa13.58□□□□□ -0.24
APH1B-202ENST00000380340 PDIA6Q15084 440 aa13.58□□□□□ -0.24
APH1B-202ENST00000380340 NBPF9Q3BBW0 867 aa13.58□□□□□ -0.24
APH1B-202ENST00000380340 OTUD7BQ6GQQ9 843 aa13.58□□□□□ -0.24
APH1B-202ENST00000380340 USP17L3A6NCW0 530 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 USP17L4A6NCW7 530 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 UFL1O94874 794 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 ZBTB48P10074 688 aaPredicted RBP13.57□□□□□ -0.24
APH1B-202ENST00000380340 PRKG1Q13976 671 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 USP17L1Q7RTZ2 530 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
APH1B-202ENST00000380340 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
APH1B-202ENST00000380340 CRHR2Q13324 411 aa13.56□□□□□ -0.24
APH1B-202ENST00000380340 COPS6Q7L5N1 327 aa13.56□□□□□ -0.24
APH1B-202ENST00000380340 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
APH1B-202ENST00000380340 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms