RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NECTIN1Q15223 517 aa23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 ATP2B3Q16720 1220 aa23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 CASZ1Q86V15 1759 aa23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 SCN7AQ01118 1682 aa23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 PRPF40BQ6NWY9 871 aaKnown RBP23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 ZNF589Q86UQ0 364 aaPredicted RBP23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 VGLL2Q8N8G2 317 aa23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 RBM8AQ9Y5S9 174 aaKnown RBP23.91■■□□□ 1.42
PDLIM5-205ENST00000380180 HSP90B1P14625 803 aaKnown RBP23.9■■□□□ 1.42
PDLIM5-205ENST00000380180 TTC39AQ5SRH9 613 aa23.9■■□□□ 1.42
PDLIM5-205ENST00000380180 KCNB2Q92953 911 aa23.9■■□□□ 1.42
PDLIM5-205ENST00000380180 AKAP11Q9UKA4 1901 aa23.9■■□□□ 1.42
PDLIM5-205ENST00000380180 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.42
PDLIM5-205ENST00000380180 LRP5O75197 1615 aa23.89■■□□□ 1.42
PDLIM5-205ENST00000380180 GNPATO15228 680 aa23.89■■□□□ 1.41
PDLIM5-205ENST00000380180 PDE8BO95263 885 aa23.89■■□□□ 1.41
PDLIM5-205ENST00000380180 IL27Q8NEV9 243 aa23.89■■□□□ 1.41
PDLIM5-205ENST00000380180 SEC31BQ9NQW1 1179 aa23.89■■□□□ 1.41
PDLIM5-205ENST00000380180 KCNJ4P48050 445 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 CCDC152Q4G0S7 254 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 TMX3Q96JJ7 454 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 BCL2L12Q9HB09 334 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 NARFQ9UHQ1 456 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 RGL2O15211 777 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 USPL1Q5W0Q7 1092 aa23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 SEC62Q99442 399 aaKnown RBP23.88■■□□□ 1.41
PDLIM5-205ENST00000380180 TAF5LO75529 589 aa23.87■■□□□ 1.41
PDLIM5-205ENST00000380180 FKBP4Q02790 459 aaKnown RBP eCLIP23.87■■□□□ 1.41
PDLIM5-205ENST00000380180 MCMDC2Q4G0Z9 681 aa23.87■■□□□ 1.41
PDLIM5-205ENST00000380180 BICDL1Q6ZP65 573 aa23.87■■□□□ 1.41
PDLIM5-205ENST00000380180 TICAM2Q86XR7 235 aa23.87■■□□□ 1.41
PDLIM5-205ENST00000380180 MYH7P12883 1935 aa23.87■■□□□ 1.41
PDLIM5-205ENST00000380180 TBC1D9BQ66K14 1250 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 CREB3L3Q68CJ9 461 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 BCL11BQ9C0K0 894 aaPredicted RBP23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 RTCBQ9Y3I0 505 aaKnown RBP23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 TAF1P21675 1872 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 MROH5Q6ZUA9 1318 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 ERFEQ4G0M1 354 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 MPHOSPH8Q99549 860 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 SRP68Q9UHB9 627 aaKnown RBP23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 C4BP0C0L5 1744 aa23.86■■□□□ 1.41
PDLIM5-205ENST00000380180 SCARF1Q14162 830 aa23.85■■□□□ 1.41
PDLIM5-205ENST00000380180 RAB3GAP1Q15042 981 aa23.85■■□□□ 1.41
PDLIM5-205ENST00000380180 ADCK5Q3MIX3 580 aa23.85■■□□□ 1.41
PDLIM5-205ENST00000380180 NOL8Q76FK4 1167 aaKnown RBP23.85■■□□□ 1.41
PDLIM5-205ENST00000380180 HELBQ8NG08 1087 aaPredicted RBP23.85■■□□□ 1.41
PDLIM5-205ENST00000380180 RTL9Q8NET4 1388 aa23.85■■□□□ 1.41
PDLIM5-205ENST00000380180 ZPR1O75312 459 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 ZKSCAN1P17029 563 aaPredicted RBP23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 CASTP20810 708 aaKnown RBP23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 SLFNL1Q499Z3 407 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 CCDC129Q6ZRS4 1044 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 ZGPATQ8N5A5 531 aaKnown RBP23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 TTC14Q96N46 770 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 ABCC12Q96J65 1359 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 SLC27A2O14975 620 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 CWC22Q9HCG8 908 aaKnown RBP23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 MYO5AQ9Y4I1 1855 aaKnown RBP23.84■■□□□ 1.41
PDLIM5-205ENST00000380180 ARHGEF1Q92888 912 aaKnown RBP23.83■■□□□ 1.41
PDLIM5-205ENST00000380180 TNPO1Q92973 898 aaKnown RBP23.83■■□□□ 1.41
PDLIM5-205ENST00000380180 JAKMIP1Q96N16 626 aaKnown RBP23.83■■□□□ 1.41
PDLIM5-205ENST00000380180 HELLSQ9NRZ9 838 aa23.83■■□□□ 1.41
PDLIM5-205ENST00000380180 TM6SF1Q9BZW5 370 aa23.83■■□□□ 1.4
PDLIM5-205ENST00000380180 C4AP0C0L4 1744 aa23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 RNF113AO15541 343 aaKnown RBP23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 CPA1P15085 419 aa23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 IGHMBP2P38935 993 aaKnown RBP23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 ZAP70P43403 619 aa23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 CUL4AQ13619 759 aa23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 PUM3Q15397 648 aaKnown RBP23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 ZMYM1Q5SVZ6 1142 aa23.82■■□□□ 1.4
PDLIM5-205ENST00000380180 FGFR2P21802 821 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 SSFA2P28290 1259 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 MCM4P33991 863 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 RNF20Q5VTR2 975 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 LPIN2Q92539 896 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 SETDB2Q96T68 719 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 ZSWIM6Q9HCJ5 1215 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 COL24A1Q17RW2 1714 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 MCAMP43121 646 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 AK2P54819 239 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 PI16Q6UXB8 463 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 ZNF512BQ96KM6 892 aaPredicted RBP23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 LRRC4BQ9NT99 713 aa23.81■■□□□ 1.4
PDLIM5-205ENST00000380180 COL4A1P02462 1669 aa23.8■■□□□ 1.4
PDLIM5-205ENST00000380180 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
PDLIM5-205ENST00000380180 C3orf67Q6ZVT6 689 aa23.8■■□□□ 1.4
PDLIM5-205ENST00000380180 SF3B3Q15393 1217 aaKnown RBP23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 FAM196AQ6ZSG2 479 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 CYP46A1Q9Y6A2 500 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 SLC10A5Q5PT55 438 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 CCDC102BQ68D86 513 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 KRT27Q7Z3Y8 459 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 HMG20BQ9P0W2 317 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 EP400Q96L91 3159 aa23.79■■□□□ 1.4
PDLIM5-205ENST00000380180 TRAPPC3LQ5T215 181 aa23.78■■□□□ 1.4
PDLIM5-205ENST00000380180 RUFY3Q7L099 469 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms