RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 NEUROD6Q96NK8 337 aa24.7■■□□□ 1.54
TFAP2A-202ENST00000379608 H3BQV1 296 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 IFFO2Q5TF58 517 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 LMBR1LQ6UX01 489 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 TRIM5Q9C035 493 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 BCL2L12Q9HB09 334 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 HMG20BQ9P0W2 317 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 GOLIM4O00461 696 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 FGD1P98174 961 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 TSGA10IPQ3SY00 556 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 FBXW7Q969H0 707 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 MAP7D2Q96T17 732 aa24.69■■□□□ 1.54
TFAP2A-202ENST00000379608 HMGN5P82970 282 aaKnown RBP24.68■■□□□ 1.54
TFAP2A-202ENST00000379608 MEGF6O75095 1541 aa24.68■■□□□ 1.54
TFAP2A-202ENST00000379608 CTDNEP1O95476 244 aa24.68■■□□□ 1.54
TFAP2A-202ENST00000379608 ARID5BQ14865 1188 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 CCDC144BQ3MJ40 725 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 CCDC144CPQ8IYA2 1237 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 ZNF594Q96JF6 807 aaPredicted RBP24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 SLIT3O75094 1523 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 OVOS2A0A0G2JMS6 1433 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 CYP27B1O15528 508 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 ZNF165P49910 485 aa24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 C11orf57Q6ZUT1 292 aaPredicted RBP24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 ALDH8A1Q9H2A2 487 aaPredicted RBP24.67■■□□□ 1.54
TFAP2A-202ENST00000379608 MCMDC2Q4G0Z9 681 aa24.66■■□□□ 1.54
TFAP2A-202ENST00000379608 GOLPH3LQ9H4A5 285 aa24.66■■□□□ 1.54
TFAP2A-202ENST00000379608 GPHNQ9NQX3 736 aaPredicted RBP24.66■■□□□ 1.54
TFAP2A-202ENST00000379608 KIF3AQ9Y496 699 aa24.66■■□□□ 1.54
TFAP2A-202ENST00000379608 MRC1P22897 1456 aa24.66■■□□□ 1.54
TFAP2A-202ENST00000379608 C16orf45Q96MC5 204 aaPredicted RBP24.66■■□□□ 1.54
TFAP2A-202ENST00000379608 CSB-PGBD3P0DP91 1061 aa24.65■■□□□ 1.54
TFAP2A-202ENST00000379608 ZNF75DP51815 510 aa24.65■■□□□ 1.54
TFAP2A-202ENST00000379608 HAUS7Q99871 368 aa24.65■■□□□ 1.54
TFAP2A-202ENST00000379608 ADD1P35611 737 aaKnown RBP24.65■■□□□ 1.54
TFAP2A-202ENST00000379608 TTLL5Q6EMB2 1281 aa24.65■■□□□ 1.54
TFAP2A-202ENST00000379608 DDX19AQ9NUU7 478 aaKnown RBP24.65■■□□□ 1.54
TFAP2A-202ENST00000379608 RBM43Q6ZSC3 357 aaKnown RBP24.64■■□□□ 1.54
TFAP2A-202ENST00000379608 TTC5Q8N0Z6 440 aa24.64■■□□□ 1.54
TFAP2A-202ENST00000379608 GTF2F1P35269 517 aaKnown RBP eCLIP24.64■■□□□ 1.53
TFAP2A-202ENST00000379608 NSUN7Q8NE18 718 aaKnown RBP24.64■■□□□ 1.53
TFAP2A-202ENST00000379608 SNRPA1P09661 255 aaKnown RBP24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 CASP7P55210 303 aa24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 RABL6Q3YEC7 729 aaPredicted RBP24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 ZNF142P52746 1687 aaPredicted RBP24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 TATP17735 454 aaPredicted RBP24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 LRRC24Q50LG9 513 aa24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 TTLL7Q6ZT98 887 aa24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 PLA2G4DQ86XP0 818 aa24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 RAB11FIP4Q86YS3 637 aa24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 U3KPZ7 1027 aaPredicted RBP24.63■■□□□ 1.53
TFAP2A-202ENST00000379608 PTPDC1A2A3K4 754 aa24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 KRT32Q14532 448 aa24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 OTUD7BQ6GQQ9 843 aa24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 CACTINQ8WUQ7 758 aaKnown RBP24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 USP28Q96RU2 1077 aa24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 GOLGA6L6A8MZA4 724 aa24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 NAA30Q147X3 362 aaPredicted RBP24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 ATP2B3Q16720 1220 aa24.62■■□□□ 1.53
TFAP2A-202ENST00000379608 CBX1P83916 185 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 HSP90AB3PQ58FF7 597 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 ZSCAN25Q6NSZ9 544 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 ATG9AQ7Z3C6 839 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 AFDNP55196 1824 aaKnown RBP24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 NBPF26B4DH59 902 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 NBPF14Q5TI25 921 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 NBPF10Q6P3W6 841 aaKnown RBP24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 NBPF15Q8N660 670 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 KBTBD3Q8NAB2 608 aa24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 TDRD7Q8NHU6 1098 aaKnown RBP24.61■■□□□ 1.53
TFAP2A-202ENST00000379608 FOXO4P98177 505 aa24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 CCAR1Q8IX12 1150 aaKnown RBP24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 CCDC94Q9BW85 323 aaPredicted RBP24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 TAOK2Q9UL54 1235 aa24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 PPP4R3BQ5MIZ7 849 aa24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 PUS3Q9BZE2 481 aaKnown RBP24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 CLIP2Q9UDT6 1046 aa24.6■■□□□ 1.53
TFAP2A-202ENST00000379608 SPDYE4A6NLX3 237 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 IFNL2Q8IZJ0 200 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 SMARCC2Q8TAQ2 1214 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 CCDC85AQ96PX6 553 aaPredicted RBP24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 PAG1Q9NWQ8 432 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 ADAMTS7Q9UKP4 1686 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 ILDR1Q86SU0 546 aaPredicted RBP24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 GJB4Q9NTQ9 266 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 SCN11AQ9UI33 1791 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 CAMTA1Q9Y6Y1 1673 aa24.59■■□□□ 1.53
TFAP2A-202ENST00000379608 LAMA4Q16363 1823 aa24.58■■□□□ 1.53
TFAP2A-202ENST00000379608 PFKFB2O60825 505 aa24.58■■□□□ 1.53
TFAP2A-202ENST00000379608 PROSER2Q86WR7 435 aaPredicted RBP24.58■■□□□ 1.53
TFAP2A-202ENST00000379608 HAND2P61296 217 aa24.58■■□□□ 1.53
TFAP2A-202ENST00000379608 DHX32Q7L7V1 743 aaKnown RBP24.58■■□□□ 1.53
TFAP2A-202ENST00000379608 ZBTB3Q9H5J0 574 aa24.58■■□□□ 1.53
TFAP2A-202ENST00000379608 IQCB1Q15051 598 aa24.57■■□□□ 1.52
TFAP2A-202ENST00000379608 FMNL2Q96PY5 1086 aa24.57■■□□□ 1.52
TFAP2A-202ENST00000379608 USP27XA6NNY8 438 aa24.57■■□□□ 1.52
TFAP2A-202ENST00000379608 E7EWF7 191 aa24.57■■□□□ 1.52
TFAP2A-202ENST00000379608 A1BGP04217 495 aa24.57■■□□□ 1.52
TFAP2A-202ENST00000379608 M0R2C6 588 aa24.56■■□□□ 1.52
TFAP2A-202ENST00000379608 HSPD1P10809 573 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms