RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 WNK3Q9BYP7 1800 aa17.76■□□□□ 0.43
PRNP-201ENST00000379440 ME3Q16798 604 aa17.76■□□□□ 0.43
PRNP-201ENST00000379440 GREM2Q9H772 168 aa17.76■□□□□ 0.43
PRNP-201ENST00000379440 RRAGDQ9NQL2 400 aaPredicted RBP17.76■□□□□ 0.43
PRNP-201ENST00000379440 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
PRNP-201ENST00000379440 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
PRNP-201ENST00000379440 PSMA5P28066 241 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 TTLL11Q8NHH1 800 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
PRNP-201ENST00000379440 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.75■□□□□ 0.43
PRNP-201ENST00000379440 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
PRNP-201ENST00000379440 ST3GAL1Q11201 340 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
PRNP-201ENST00000379440 BLOC1S2Q6QNY1 142 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 ITGA6P23229 1130 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 XAGE2Q96GT9 111 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
PRNP-201ENST00000379440 THRAP3Q9Y2W1 955 aaKnown RBP17.75■□□□□ 0.43
PRNP-201ENST00000379440 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
PRNP-201ENST00000379440 GRPEL1Q9HAV7 217 aa17.74■□□□□ 0.43
PRNP-201ENST00000379440 PALLDQ8WX93 1383 aa17.74■□□□□ 0.43
PRNP-201ENST00000379440 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
PRNP-201ENST00000379440 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
PRNP-201ENST00000379440 ATP6V1AP38606 617 aa17.74■□□□□ 0.43
PRNP-201ENST00000379440 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
PRNP-201ENST00000379440 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
PRNP-201ENST00000379440 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
PRNP-201ENST00000379440 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
PRNP-201ENST00000379440 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 SYT1P21579 422 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 RPS6KB1P23443 525 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 MRE11P49959 708 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 GORABQ5T7V8 394 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 INTS5Q6P9B9 1019 aaKnown RBP17.73■□□□□ 0.43
PRNP-201ENST00000379440 BBXQ8WY36 941 aaPredicted RBP17.73■□□□□ 0.43
PRNP-201ENST00000379440 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 CTSWP56202 376 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 TSGA10IPQ3SY00 556 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 LDHAL6AQ6ZMR3 332 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
PRNP-201ENST00000379440 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 CYP21A2P08686 494 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 GJB2P29033 226 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
PRNP-201ENST00000379440 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
PRNP-201ENST00000379440 AKAP2Q9Y2D5 859 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 EIF5P55010 431 aaKnown RBP17.72■□□□□ 0.43
PRNP-201ENST00000379440 SCARF1Q14162 830 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 TTC39AQ5SRH9 613 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 RIPOR2Q9Y4F9 1068 aa17.72■□□□□ 0.43
PRNP-201ENST00000379440 NUP98P52948 1817 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 FAM177BA6PVY3 158 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 STX6O43752 255 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.43
PRNP-201ENST00000379440 ZNF34Q8IZ26 560 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
PRNP-201ENST00000379440 CRKLP46109 303 aaKnown RBP17.71■□□□□ 0.43
PRNP-201ENST00000379440 METTL24Q5JXM2 366 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
PRNP-201ENST00000379440 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.43
PRNP-201ENST00000379440 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 KCNQ2O43526 872 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 SIK1P57059 783 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 ITPK1Q13572 414 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 CCDC87Q9NVE4 849 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 RNF113AO15541 343 aaKnown RBP17.7■□□□□ 0.42
PRNP-201ENST00000379440 ZSCAN22P10073 491 aaPredicted RBP17.7■□□□□ 0.42
PRNP-201ENST00000379440 PI16Q6UXB8 463 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
PRNP-201ENST00000379440 RIC1Q4ADV7 1423 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 PDE8AO60658 829 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 ZSCAN23Q3MJ62 389 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.69■□□□□ 0.42
PRNP-201ENST00000379440 ISY1Q9ULR0 285 aaKnown RBP17.69■□□□□ 0.42
PRNP-201ENST00000379440 A0A0G2JLW4 131 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 ANKRD36CQ5JPF3 1778 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 MAST3O60307 1309 aa17.69■□□□□ 0.42
PRNP-201ENST00000379440 KRT32Q14532 448 aa17.68■□□□□ 0.42
PRNP-201ENST00000379440 SLIT2O94813 1529 aa17.68■□□□□ 0.42
PRNP-201ENST00000379440 M0R2C6 588 aa17.68■□□□□ 0.42
PRNP-201ENST00000379440 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
PRNP-201ENST00000379440 ZAP70P43403 619 aa17.68■□□□□ 0.42
PRNP-201ENST00000379440 STK3Q13188 491 aa17.68■□□□□ 0.42
PRNP-201ENST00000379440 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms