RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PTH1RQ03431 593 aa12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 ZSCAN31Q96LW9 406 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 LIMCH1Q9UPQ0 1083 aa12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 MYH3P11055 1940 aa12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 IL6STP40189 918 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 DBNDD2Q9BQY9 259 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 AKAP2Q9Y2D5 859 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 NUP98P52948 1817 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 GOLGA6L3A6NEY3 463 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 BRD1O95696 1058 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 CSF1RP07333 972 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 KCNJ4P48050 445 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 CREB3L3Q68CJ9 461 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 FAM227BQ96M60 508 aa12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-201ENST00000379340 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 QSER1Q2KHR3 1735 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 ABCC12Q96J65 1359 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 RPAP1Q9BWH6 1393 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 POLD1P28340 1107 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 AK2P54819 239 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 KRT32Q14532 448 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 KBTBD3Q8NAB2 608 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
POLR2J3-201ENST00000379340 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 SLC27A2O14975 620 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 RUFY3Q7L099 469 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 JAKMIP1Q96N16 626 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 ZDHHC9Q9Y397 364 aa12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-201ENST00000379340 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 HSPA6P17066 643 aa12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 NLRP10Q86W26 655 aa12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 AK7Q96M32 723 aa12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 HELLSQ9NRZ9 838 aa12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-201ENST00000379340 TAF5LO75529 589 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 MCMDC2Q4G0Z9 681 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 LRRC24Q50LG9 513 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 MSL1Q68DK7 614 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 MCTP1Q6DN14 999 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.4
POLR2J3-201ENST00000379340 A0A1B0GUL7 405 aa12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 MRE11P49959 708 aa12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 PKP1Q13835 747 aa12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 LMBRD1Q9NUN5 540 aa12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-201ENST00000379340 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 BLOC1S2Q6QNY1 142 aa12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 ZNF594Q96JF6 807 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-201ENST00000379340 LAMB2P55268 1798 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 ANKRD18BA2A2Z9 1011 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 PDE8AO60658 829 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 MBD3O95983 291 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 CTSWP56202 376 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 HLFQ16534 295 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 ADCK5Q3MIX3 580 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms