RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 CBX1P83916 185 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 RTN1Q16799 776 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 ZNF830Q96NB3 372 aaPredicted RBP12.99□□□□□ -0.33
RPGR-203ENST00000378505 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 CENPHQ9H3R5 247 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
RPGR-203ENST00000378505 SKILP12757 684 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 CYP7A1P22680 504 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 UBASH3AP57075 661 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 TFCP2Q12800 502 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 SPTLC2O15270 562 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 MTIF2P46199 727 aaKnown RBP12.98□□□□□ -0.33
RPGR-203ENST00000378505 VPS36Q86VN1 386 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 CALML4Q96GE6 196 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 MCM3P25205 808 aa12.98□□□□□ -0.33
RPGR-203ENST00000378505 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
RPGR-203ENST00000378505 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 PAFAH1B1P43034 410 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
RPGR-203ENST00000378505 IDEP14735 1019 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 N4BP3O15049 544 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 SGSM2O43147 1006 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 IL2RBP14784 551 aa12.97□□□□□ -0.33
RPGR-203ENST00000378505 MBD5Q9P267 1494 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 GNG11P61952 73 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
RPGR-203ENST00000378505 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 MARCKSP29966 332 aaPredicted RBP12.96□□□□□ -0.34
RPGR-203ENST00000378505 APOBRQ0VD83 1088 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 STX8Q9UNK0 236 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 TNIP1Q15025 636 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 ATL3Q6DD88 541 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 ZNF790Q6PG37 636 aa12.96□□□□□ -0.34
RPGR-203ENST00000378505 GNAQP50148 359 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 SPAG1Q07617 926 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
RPGR-203ENST00000378505 TDRD12Q587J7 1177 aaKnown RBP12.95□□□□□ -0.34
RPGR-203ENST00000378505 IFIT1BQ5T764 474 aaKnown RBP12.95□□□□□ -0.34
RPGR-203ENST00000378505 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
RPGR-203ENST00000378505 AOPEPQ8N6M6 819 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 CPA1P15085 419 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 PNMA6EA0A0J9YXQ4 647 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 BRAPQ7Z569 592 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 NBPF5PQ86XG9 351 aaPredicted RBP12.95□□□□□ -0.34
RPGR-203ENST00000378505 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
RPGR-203ENST00000378505 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPGR-203ENST00000378505 NEFHP12036 1026 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 GNAT2P19087 354 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 ERICH4A6NGS2 130 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 NAA16Q6N069 864 aaPredicted RBP12.94□□□□□ -0.34
RPGR-203ENST00000378505 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
RPGR-203ENST00000378505 HELLSQ9NRZ9 838 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
RPGR-203ENST00000378505 IQSEC3Q9UPP2 1182 aaPredicted RBP12.94□□□□□ -0.34
RPGR-203ENST00000378505 ABCC4O15439 1325 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 USP19O94966 1318 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 CUL5Q93034 780 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 SNX14Q9Y5W7 946 aa12.94□□□□□ -0.34
RPGR-203ENST00000378505 EYA2O00167 538 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 GSTO1P78417 241 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 ATP10AO60312 1499 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
RPGR-203ENST00000378505 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
RPGR-203ENST00000378505 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 LRRC27Q9C0I9 530 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 TUBB4AP04350 444 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 PPP4R3BQ5MIZ7 849 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
RPGR-203ENST00000378505 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
RPGR-203ENST00000378505 AFMP43652 599 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms