RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 H7C1D1 291 aa28.55■■■□□ 2.16
CCDC107-203ENST00000378407 NEURL1BA8MQ27 555 aa28.54■■■□□ 2.16
CCDC107-203ENST00000378407 UBE3BQ7Z3V4 1068 aa28.54■■■□□ 2.16
CCDC107-203ENST00000378407 CNOT7Q9UIV1 285 aaKnown RBP28.54■■■□□ 2.16
CCDC107-203ENST00000378407 PSMD14O00487 310 aa28.53■■■□□ 2.16
CCDC107-203ENST00000378407 VEGFBP49765 207 aa28.53■■■□□ 2.16
CCDC107-203ENST00000378407 EXOSC9Q06265 439 aaKnown RBP28.53■■■□□ 2.16
CCDC107-203ENST00000378407 PAXIP1Q6ZW49 1069 aaPredicted RBP28.53■■■□□ 2.16
CCDC107-203ENST00000378407 MICALL2Q8IY33 904 aa28.53■■■□□ 2.16
CCDC107-203ENST00000378407 MYH16Q9H6N6 1097 aa28.53■■■□□ 2.16
CCDC107-203ENST00000378407 PODXL2Q9NZ53 605 aa28.53■■■□□ 2.16
CCDC107-203ENST00000378407 ZBTB12Q9Y330 459 aaPredicted RBP28.53■■■□□ 2.16
CCDC107-203ENST00000378407 TRAF5O00463 557 aa28.52■■■□□ 2.16
CCDC107-203ENST00000378407 XDHP47989 1333 aa28.51■■■□□ 2.15
CCDC107-203ENST00000378407 DEFB115Q30KQ5 88 aa28.51■■■□□ 2.15
CCDC107-203ENST00000378407 COL13A1Q5TAT6 717 aaPredicted RBP28.51■■■□□ 2.15
CCDC107-203ENST00000378407 AIDAQ96BJ3 306 aa28.51■■■□□ 2.15
CCDC107-203ENST00000378407 RASSF10A6NK89 507 aa28.5■■■□□ 2.15
CCDC107-203ENST00000378407 FMR1Q06787 632 aaKnown RBP eCLIP28.5■■■□□ 2.15
CCDC107-203ENST00000378407 TRPM4Q8TD43 1214 aa28.5■■■□□ 2.15
CCDC107-203ENST00000378407 DNAAF4Q8WXU2 420 aa28.5■■■□□ 2.15
CCDC107-203ENST00000378407 RPS12P25398 132 aaKnown RBP28.49■■■□□ 2.15
CCDC107-203ENST00000378407 GREM2Q9H772 168 aa28.49■■■□□ 2.15
CCDC107-203ENST00000378407 VAMP4O75379 141 aa28.48■■■□□ 2.15
CCDC107-203ENST00000378407 GCKRQ14397 625 aa28.48■■■□□ 2.15
CCDC107-203ENST00000378407 TTLL11Q8NHH1 800 aa28.48■■■□□ 2.15
CCDC107-203ENST00000378407 ZC3H15Q8WU90 426 aaKnown RBP28.48■■■□□ 2.15
CCDC107-203ENST00000378407 DPF2Q92785 391 aa28.48■■■□□ 2.15
CCDC107-203ENST00000378407 SHTN1A0MZ66 631 aa28.47■■■□□ 2.15
CCDC107-203ENST00000378407 GRM1Q13255 1194 aa28.47■■■□□ 2.15
CCDC107-203ENST00000378407 GLIS2Q9BZE0 524 aaPredicted RBP28.47■■■□□ 2.15
CCDC107-203ENST00000378407 ZNF408Q9H9D4 720 aa28.47■■■□□ 2.15
CCDC107-203ENST00000378407 ATP2B4P23634 1241 aa28.46■■■□□ 2.15
CCDC107-203ENST00000378407 TNS4Q8IZW8 715 aa28.46■■■□□ 2.15
CCDC107-203ENST00000378407 LINS1Q8NG48 757 aa28.46■■■□□ 2.15
CCDC107-203ENST00000378407 RTL9Q8NET4 1388 aa28.46■■■□□ 2.15
CCDC107-203ENST00000378407 H7C1W4 665 aa28.45■■■□□ 2.14
CCDC107-203ENST00000378407 IGHMBP2P38935 993 aaKnown RBP28.45■■■□□ 2.14
CCDC107-203ENST00000378407 TBC1D10BQ4KMP7 808 aaPredicted RBP28.45■■■□□ 2.14
CCDC107-203ENST00000378407 KCNQ5Q9NR82 932 aa28.45■■■□□ 2.14
CCDC107-203ENST00000378407 MYH3P11055 1940 aa28.44■■■□□ 2.14
CCDC107-203ENST00000378407 CELF2O95319 508 aaKnown RBP28.44■■■□□ 2.14
CCDC107-203ENST00000378407 HIRAP54198 1017 aaPredicted RBP28.44■■■□□ 2.14
CCDC107-203ENST00000378407 RBM26Q5T8P6 1007 aaKnown RBP28.44■■■□□ 2.14
CCDC107-203ENST00000378407 SAMD7Q7Z3H4 446 aa28.44■■■□□ 2.14
CCDC107-203ENST00000378407 WDR33Q9C0J8 1336 aaKnown RBP28.43■■■□□ 2.14
CCDC107-203ENST00000378407 ECE1P42892 770 aa28.43■■■□□ 2.14
CCDC107-203ENST00000378407 CDC37L1Q7L3B6 337 aa28.43■■■□□ 2.14
CCDC107-203ENST00000378407 SPINK5Q9NQ38 1064 aaPredicted RBP28.43■■■□□ 2.14
CCDC107-203ENST00000378407 BSDC1Q9NW68 430 aaPredicted RBP28.43■■■□□ 2.14
CCDC107-203ENST00000378407 SPEF2Q9C093 1822 aa28.42■■■□□ 2.14
CCDC107-203ENST00000378407 CST9Q5W186 159 aa28.42■■■□□ 2.14
CCDC107-203ENST00000378407 PGAP2Q9UHJ9 254 aa28.42■■■□□ 2.14
CCDC107-203ENST00000378407 TRPM7Q96QT4 1865 aa28.41■■■□□ 2.14
CCDC107-203ENST00000378407 FAM161AQ3B820 660 aa28.41■■■□□ 2.14
CCDC107-203ENST00000378407 MPHOSPH8Q99549 860 aa28.41■■■□□ 2.14
CCDC107-203ENST00000378407 MINPP1Q9UNW1 487 aa28.41■■■□□ 2.14
CCDC107-203ENST00000378407 F6X3S4 739 aa28.4■■■□□ 2.14
CCDC107-203ENST00000378407 FOXN1O15353 648 aa28.4■■■□□ 2.14
CCDC107-203ENST00000378407 ITGA6P23229 1130 aa28.4■■■□□ 2.14
CCDC107-203ENST00000378407 KIF4BQ2VIQ3 1234 aa28.4■■■□□ 2.14
CCDC107-203ENST00000378407 CAPNS2Q96L46 248 aa28.4■■■□□ 2.14
CCDC107-203ENST00000378407 TLL2Q9Y6L7 1015 aa28.4■■■□□ 2.14
CCDC107-203ENST00000378407 VIL1P09327 827 aaKnown RBP28.39■■■□□ 2.14
CCDC107-203ENST00000378407 USP48Q86UV5 1035 aa28.39■■■□□ 2.14
CCDC107-203ENST00000378407 PLA2G12BQ9BX93 195 aa28.39■■■□□ 2.14
CCDC107-203ENST00000378407 CHMP3Q9Y3E7 222 aa28.39■■■□□ 2.14
CCDC107-203ENST00000378407 MED23Q9ULK4 1368 aa28.38■■■□□ 2.13
CCDC107-203ENST00000378407 CYP4F22Q6NT55 531 aa28.38■■■□□ 2.13
CCDC107-203ENST00000378407 RSBN1LQ6PCB5 846 aaPredicted RBP28.38■■■□□ 2.13
CCDC107-203ENST00000378407 DCPSQ96C86 337 aaKnown RBP28.38■■■□□ 2.13
CCDC107-203ENST00000378407 CACNA1FO60840 1977 aa28.38■■■□□ 2.13
CCDC107-203ENST00000378407 EGFRP00533 1210 aa28.37■■■□□ 2.13
CCDC107-203ENST00000378407 KCNJ4P48050 445 aa28.37■■■□□ 2.13
CCDC107-203ENST00000378407 CTCFP49711 727 aaPredicted RBP28.37■■■□□ 2.13
CCDC107-203ENST00000378407 CCT4P50991 539 aaKnown RBP28.37■■■□□ 2.13
CCDC107-203ENST00000378407 MAP2K1Q02750 393 aaPredicted RBP28.37■■■□□ 2.13
CCDC107-203ENST00000378407 KRT26Q7Z3Y9 468 aa28.37■■■□□ 2.13
CCDC107-203ENST00000378407 FBXW7Q969H0 707 aa28.37■■■□□ 2.13
CCDC107-203ENST00000378407 CASP7P55210 303 aa28.36■■■□□ 2.13
CCDC107-203ENST00000378407 PODNQ7Z5L7 613 aa28.36■■■□□ 2.13
CCDC107-203ENST00000378407 SCN9AQ15858 1988 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 ANKRD18BA2A2Z9 1011 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 USP17L3A6NCW0 530 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 USP17L4A6NCW7 530 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 SLC4A10Q6U841 1118 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 USP17L1Q7RTZ2 530 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 AGBL3Q8NEM8 1001 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 BEGAINQ9BUH8 593 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 ANKRD2Q9GZV1 360 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 WBP1LQ9NX94 342 aa28.35■■■□□ 2.13
CCDC107-203ENST00000378407 CAPN15O75808 1086 aa28.34■■■□□ 2.13
CCDC107-203ENST00000378407 BEND3Q5T5X7 828 aa28.34■■■□□ 2.13
CCDC107-203ENST00000378407 SAPCD2Q86UD0 394 aa28.34■■■□□ 2.13
CCDC107-203ENST00000378407 GGA3Q9NZ52 723 aa28.34■■■□□ 2.13
CCDC107-203ENST00000378407 SULF1Q8IWU6 871 aa28.33■■■□□ 2.13
CCDC107-203ENST00000378407 LEMD3Q9Y2U8 911 aa28.33■■■□□ 2.13
CCDC107-203ENST00000378407 WTIPA6NIX2 430 aaPredicted RBP28.32■■■□□ 2.12
CCDC107-203ENST00000378407 CSF1RP07333 972 aa28.32■■■□□ 2.12
CCDC107-203ENST00000378407 IFIT5Q13325 482 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms