RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 MBD3O95983 291 aa22.94■■□□□ 1.26
PCDHA4-201ENST00000378125 IFIT5Q13325 482 aaKnown RBP22.94■■□□□ 1.26
PCDHA4-201ENST00000378125 ACSBG1Q96GR2 724 aa22.94■■□□□ 1.26
PCDHA4-201ENST00000378125 NEK1Q96PY6 1258 aa22.94■■□□□ 1.26
PCDHA4-201ENST00000378125 FIBPO43427 364 aa22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 TRIM28Q13263 835 aaKnown RBP22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 NLRP10Q86W26 655 aa22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 XAGE2Q96GT9 111 aa22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 GREM2Q9H772 168 aa22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 MTMR6Q9Y217 621 aa22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 U3KPZ7 1027 aaPredicted RBP22.93■■□□□ 1.26
PCDHA4-201ENST00000378125 TTC39AQ5SRH9 613 aa22.92■■□□□ 1.26
PCDHA4-201ENST00000378125 COL14A1Q05707 1796 aaKnown RBP22.92■■□□□ 1.26
PCDHA4-201ENST00000378125 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 FAM177BA6PVY3 158 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 TSGA10IPQ3SY00 556 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 LARP1BQ659C4 914 aaKnown RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 PI16Q6UXB8 463 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 Q6ZUG5 572 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 FERMT3Q86UX7 667 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 TRMT112Q9UI30 125 aaKnown RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 PALLDQ8WX93 1383 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 SH3TC1Q8TE82 1336 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 ITGA6P23229 1130 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 DNM1Q05193 864 aaKnown RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 SCARF1Q14162 830 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 ANKRD1Q15327 319 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 HSP90AB3PQ58FF7 597 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 STOX1Q6ZVD7 989 aa22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
PCDHA4-201ENST00000378125 RFX7Q2KHR2 1363 aa22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 CSF1RP07333 972 aa22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 CCDC158Q5M9N0 1113 aa22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 HSP90B1P14625 803 aaKnown RBP22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 KRT32Q14532 448 aa22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 DZIP3Q86Y13 1208 aaKnown RBP22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 TTLL11Q8NHH1 800 aa22.9■■□□□ 1.26
PCDHA4-201ENST00000378125 COL16A1Q07092 1604 aaPredicted RBP22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 M0R2C6 588 aa22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 IRS4O14654 1257 aaPredicted RBP22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 ZMYM1Q5SVZ6 1142 aa22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 LRSAM1Q6UWE0 723 aa22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 LDHAL6AQ6ZMR3 332 aa22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 HELLSQ9NRZ9 838 aa22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 MAST3O60307 1309 aa22.89■■□□□ 1.25
PCDHA4-201ENST00000378125 RNF113AO15541 343 aaKnown RBP22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 METTL24Q5JXM2 366 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 FGD1P98174 961 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 FAM173BQ6P4H8 233 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 CDC37L1Q7L3B6 337 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 RNF214Q8ND24 703 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 PLA2G12BQ9BX93 195 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 AKAP2Q9Y2D5 859 aa22.88■■□□□ 1.25
PCDHA4-201ENST00000378125 HSPD1P10809 573 aaKnown RBP22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 TRIM44Q96DX7 344 aaPredicted RBP22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 CNNM1Q9NRU3 951 aa22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 ZAP70P43403 619 aa22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 WASHC4Q2M389 1173 aa22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 BRF1Q92994 677 aa22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 OSBP2Q969R2 916 aa22.87■■□□□ 1.25
PCDHA4-201ENST00000378125 CTSWP56202 376 aa22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 TTLL5Q6EMB2 1281 aa22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 JAK2O60674 1132 aa22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 DDB1Q16531 1140 aa22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 CHST3Q7LGC8 479 aa22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 ANP32BQ92688 251 aaKnown RBP22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 ATP6V1DQ9Y5K8 247 aa22.86■■□□□ 1.25
PCDHA4-201ENST00000378125 UBN2Q6ZU65 1347 aa22.85■■□□□ 1.25
PCDHA4-201ENST00000378125 ALDH8A1Q9H2A2 487 aaPredicted RBP22.85■■□□□ 1.25
PCDHA4-201ENST00000378125 ANKRD18BA2A2Z9 1011 aa22.85■■□□□ 1.25
PCDHA4-201ENST00000378125 ATP2B3Q16720 1220 aa22.85■■□□□ 1.25
PCDHA4-201ENST00000378125 RIPOR2Q9Y4F9 1068 aa22.85■■□□□ 1.25
PCDHA4-201ENST00000378125 LRP6O75581 1613 aa22.84■■□□□ 1.25
PCDHA4-201ENST00000378125 CDHR2Q9BYE9 1310 aa22.84■■□□□ 1.25
PCDHA4-201ENST00000378125 PPFIA3O75145 1194 aa22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 TMEM87AQ8NBN3 555 aa22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 HELBQ8NG08 1087 aaPredicted RBP22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 DDX11Q96FC9 970 aa22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 DSCC1Q9BVC3 393 aa22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 NAP1L2Q9ULW6 460 aaPredicted RBP22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 RIC1Q4ADV7 1423 aa22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 ATP6V1AP38606 617 aa22.83■■□□□ 1.25
PCDHA4-201ENST00000378125 DOT1LQ8TEK3 1739 aa22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 HCLS1P14317 486 aaPredicted RBP22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 HAND2P61296 217 aa22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 CCDC173Q0VFZ6 552 aa22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 SYAP1Q96A49 352 aaPredicted RBP22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 IL6STP40189 918 aaPredicted RBP22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 APOBRQ0VD83 1088 aa22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 GTF3C6Q969F1 213 aa22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 SPATA31A1Q5TZJ5 1347 aa22.82■■□□□ 1.24
PCDHA4-201ENST00000378125 E7EWF7 191 aa22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 FOSBP53539 338 aa22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 PIP4K2BP78356 416 aa22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 MARCH10Q8NA82 808 aaPredicted RBP22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 FBXO3Q9UK99 471 aa22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 MCAMP43121 646 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms