RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 VGLL2Q8N8G2 317 aa25.78■■□□□ 1.72
RNF38-205ENST00000377877 AOX1Q06278 1338 aa25.78■■□□□ 1.72
RNF38-205ENST00000377877 TTC41PQ6P2S7 1318 aa25.78■■□□□ 1.72
RNF38-205ENST00000377877 IGHMBP2P38935 993 aaKnown RBP25.78■■□□□ 1.72
RNF38-205ENST00000377877 SPEF2Q9C093 1822 aa25.78■■□□□ 1.72
RNF38-205ENST00000377877 A0A1B0GUL7 405 aa25.77■■□□□ 1.72
RNF38-205ENST00000377877 MAP4K4O95819 1239 aaPredicted RBP25.77■■□□□ 1.72
RNF38-205ENST00000377877 ST5P78524 1137 aa25.77■■□□□ 1.72
RNF38-205ENST00000377877 UPF1Q92900 1129 aaKnown RBP eCLIP25.77■■□□□ 1.72
RNF38-205ENST00000377877 CDC5LQ99459 802 aaKnown RBP25.77■■□□□ 1.72
RNF38-205ENST00000377877 QSER1Q2KHR3 1735 aa25.76■■□□□ 1.71
RNF38-205ENST00000377877 ANKRD18AQ8IVF6 992 aa25.76■■□□□ 1.71
RNF38-205ENST00000377877 PDE8BO95263 885 aa25.75■■□□□ 1.71
RNF38-205ENST00000377877 PARP3Q9Y6F1 533 aa25.75■■□□□ 1.71
RNF38-205ENST00000377877 LRP5O75197 1615 aa25.75■■□□□ 1.71
RNF38-205ENST00000377877 SNAP23O00161 211 aa25.75■■□□□ 1.71
RNF38-205ENST00000377877 TAF5LO75529 589 aa25.75■■□□□ 1.71
RNF38-205ENST00000377877 RPS8P62241 208 aaKnown RBP25.75■■□□□ 1.71
RNF38-205ENST00000377877 ADORA1P30542 326 aa25.74■■□□□ 1.71
RNF38-205ENST00000377877 GPATCH3Q96I76 525 aa25.74■■□□□ 1.71
RNF38-205ENST00000377877 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
RNF38-205ENST00000377877 ZNF609O15014 1411 aa25.74■■□□□ 1.71
RNF38-205ENST00000377877 MROH5Q6ZUA9 1318 aa25.74■■□□□ 1.71
RNF38-205ENST00000377877 TRIM6-TRIM34B2RNG4 842 aa25.73■■□□□ 1.71
RNF38-205ENST00000377877 GLRX3O76003 335 aaKnown RBP25.73■■□□□ 1.71
RNF38-205ENST00000377877 NBR1Q14596 966 aa25.73■■□□□ 1.71
RNF38-205ENST00000377877 DDX46Q7L014 1031 aaKnown RBP25.73■■□□□ 1.71
RNF38-205ENST00000377877 BSDC1Q9NW68 430 aaPredicted RBP25.73■■□□□ 1.71
RNF38-205ENST00000377877 CRY2Q49AN0 593 aa25.73■■□□□ 1.71
RNF38-205ENST00000377877 RILPL2Q969X0 211 aa25.73■■□□□ 1.71
RNF38-205ENST00000377877 BOLA2Q9H3K6 86 aa25.73■■□□□ 1.71
RNF38-205ENST00000377877 NRXN2Q9P2S2 1712 aa25.72■■□□□ 1.71
RNF38-205ENST00000377877 ERC2O15083 957 aa25.72■■□□□ 1.71
RNF38-205ENST00000377877 CHRNDQ07001 517 aa25.72■■□□□ 1.71
RNF38-205ENST00000377877 ATP2B3Q16720 1220 aa25.72■■□□□ 1.71
RNF38-205ENST00000377877 TBC1D9Q6ZT07 1266 aa25.72■■□□□ 1.71
RNF38-205ENST00000377877 XAGE2Q96GT9 111 aa25.72■■□□□ 1.71
RNF38-205ENST00000377877 MINPP1Q9UNW1 487 aa25.71■■□□□ 1.71
RNF38-205ENST00000377877 KLRG2A4D1S0 409 aaPredicted RBP25.71■■□□□ 1.71
RNF38-205ENST00000377877 WTIPA6NIX2 430 aaPredicted RBP25.71■■□□□ 1.71
RNF38-205ENST00000377877 DEKP35659 375 aaKnown RBP25.71■■□□□ 1.71
RNF38-205ENST00000377877 SLC51AQ86UW1 340 aa25.71■■□□□ 1.71
RNF38-205ENST00000377877 ATP5JP18859 108 aa25.7■■□□□ 1.7
RNF38-205ENST00000377877 ANKRD31Q8N7Z5 1873 aa25.7■■□□□ 1.7
RNF38-205ENST00000377877 CDC45O75419 566 aa25.69■■□□□ 1.7
RNF38-205ENST00000377877 FGFR2P21802 821 aa25.69■■□□□ 1.7
RNF38-205ENST00000377877 DDRGK1Q96HY6 314 aa25.69■■□□□ 1.7
RNF38-205ENST00000377877 BRIP1Q9BX63 1249 aa25.69■■□□□ 1.7
RNF38-205ENST00000377877 NDUFB9Q9Y6M9 179 aa25.69■■□□□ 1.7
RNF38-205ENST00000377877 RPGRQ92834 1020 aaKnown RBP25.68■■□□□ 1.7
RNF38-205ENST00000377877 GRAPQ13588 217 aa25.67■■□□□ 1.7
RNF38-205ENST00000377877 GRAPLQ8TC17 118 aaPredicted RBP25.67■■□□□ 1.7
RNF38-205ENST00000377877 PUM3Q15397 648 aaKnown RBP25.67■■□□□ 1.7
RNF38-205ENST00000377877 EDC3Q96F86 508 aaKnown RBP25.67■■□□□ 1.7
RNF38-205ENST00000377877 HOXA10P31260 410 aaPredicted RBP25.65■■□□□ 1.7
RNF38-205ENST00000377877 LPIN2Q92539 896 aa25.65■■□□□ 1.7
RNF38-205ENST00000377877 GORABQ5T7V8 394 aa25.65■■□□□ 1.7
RNF38-205ENST00000377877 RBM17Q96I25 401 aaKnown RBP25.65■■□□□ 1.7
RNF38-205ENST00000377877 CNTROBQ8N137 903 aa25.64■■□□□ 1.69
RNF38-205ENST00000377877 AK9Q5TCS8 1911 aa25.63■■□□□ 1.69
RNF38-205ENST00000377877 SRGNP10124 158 aa25.63■■□□□ 1.69
RNF38-205ENST00000377877 CHMLP26374 656 aa25.63■■□□□ 1.69
RNF38-205ENST00000377877 CCDC158Q5M9N0 1113 aa25.63■■□□□ 1.69
RNF38-205ENST00000377877 SLC16A10Q8TF71 515 aa25.63■■□□□ 1.69
RNF38-205ENST00000377877 HAUS7Q99871 368 aa25.62■■□□□ 1.69
RNF38-205ENST00000377877 MFAP1P55081 439 aaKnown RBP25.62■■□□□ 1.69
RNF38-205ENST00000377877 SCARF1Q14162 830 aa25.62■■□□□ 1.69
RNF38-205ENST00000377877 CRAMP1Q96RY5 1269 aa25.62■■□□□ 1.69
RNF38-205ENST00000377877 DNAJC2Q99543 621 aaKnown RBP25.62■■□□□ 1.69
RNF38-205ENST00000377877 A0A1B0GUL6 1792 aa25.62■■□□□ 1.69
RNF38-205ENST00000377877 IFIT1P09914 478 aaKnown RBP25.61■■□□□ 1.69
RNF38-205ENST00000377877 SLC5A1P13866 664 aa25.61■■□□□ 1.69
RNF38-205ENST00000377877 PDE6BP35913 854 aa25.61■■□□□ 1.69
RNF38-205ENST00000377877 PHKA1P46020 1223 aa25.61■■□□□ 1.69
RNF38-205ENST00000377877 R3HDM1Q15032 1099 aaKnown RBP25.61■■□□□ 1.69
RNF38-205ENST00000377877 TTC39AQ5SRH9 613 aa25.61■■□□□ 1.69
RNF38-205ENST00000377877 EVI5LQ96CN4 794 aa25.61■■□□□ 1.69
RNF38-205ENST00000377877 CCDC102BQ68D86 513 aa25.6■■□□□ 1.69
RNF38-205ENST00000377877 ZBTB7AO95365 584 aa25.6■■□□□ 1.69
RNF38-205ENST00000377877 SNRKQ9NRH2 765 aa25.6■■□□□ 1.69
RNF38-205ENST00000377877 BBOX1O75936 387 aa25.58■■□□□ 1.69
RNF38-205ENST00000377877 BCAMP50895 628 aa25.58■■□□□ 1.69
RNF38-205ENST00000377877 UBE4AQ14139 1066 aa25.58■■□□□ 1.69
RNF38-205ENST00000377877 NPR1P16066 1061 aa25.58■■□□□ 1.69
RNF38-205ENST00000377877 PI16Q6UXB8 463 aa25.58■■□□□ 1.69
RNF38-205ENST00000377877 ANKRD2Q9GZV1 360 aa25.58■■□□□ 1.69
RNF38-205ENST00000377877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.57■■□□□ 1.68
RNF38-205ENST00000377877 IL25Q9H293 177 aa25.57■■□□□ 1.68
RNF38-205ENST00000377877 ANTXR1Q9H6X2 564 aa25.57■■□□□ 1.68
RNF38-205ENST00000377877 ATF5Q9Y2D1 282 aaPredicted RBP25.57■■□□□ 1.68
RNF38-205ENST00000377877 GOLIM4O00461 696 aa25.56■■□□□ 1.68
RNF38-205ENST00000377877 KLRK1P26718 216 aa25.56■■□□□ 1.68
RNF38-205ENST00000377877 MCAMP43121 646 aa25.56■■□□□ 1.68
RNF38-205ENST00000377877 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
RNF38-205ENST00000377877 FKBP4Q02790 459 aaKnown RBP eCLIP25.56■■□□□ 1.68
RNF38-205ENST00000377877 CASC1Q6TDU7 716 aa25.56■■□□□ 1.68
RNF38-205ENST00000377877 COL11A2P13942 1736 aaPredicted RBP25.56■■□□□ 1.68
RNF38-205ENST00000377877 ARAP2Q8WZ64 1704 aa25.56■■□□□ 1.68
RNF38-205ENST00000377877 AKAP11Q9UKA4 1901 aa25.55■■□□□ 1.68
RNF38-205ENST00000377877 CHRNA5P30532 468 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms