RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 FBXO3Q9UK99 471 aa25.93■■□□□ 1.74
RNF39-202ENST00000376751 TOB2Q14106 344 aaPredicted RBP25.93■■□□□ 1.74
RNF39-202ENST00000376751 HSP90AB3PQ58FF7 597 aa25.93■■□□□ 1.74
RNF39-202ENST00000376751 SLIT2O94813 1529 aa25.92■■□□□ 1.74
RNF39-202ENST00000376751 ZSCAN22P10073 491 aaPredicted RBP25.92■■□□□ 1.74
RNF39-202ENST00000376751 GJB2P29033 226 aa25.92■■□□□ 1.74
RNF39-202ENST00000376751 IFIT5Q13325 482 aaKnown RBP25.92■■□□□ 1.74
RNF39-202ENST00000376751 TBC1D2BQ9UPU7 963 aa25.92■■□□□ 1.74
RNF39-202ENST00000376751 U3KPZ7 1027 aaPredicted RBP25.92■■□□□ 1.74
RNF39-202ENST00000376751 STX6O43752 255 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 ZNF445P59923 1031 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 ZMYM1Q5SVZ6 1142 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 TTLL11Q8NHH1 800 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 CDCA7Q9BWT1 371 aaPredicted RBP25.91■■□□□ 1.74
RNF39-202ENST00000376751 ALDH8A1Q9H2A2 487 aaPredicted RBP25.91■■□□□ 1.74
RNF39-202ENST00000376751 GREM2Q9H772 168 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 LAMA4Q16363 1823 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 IL6STP40189 918 aaPredicted RBP25.91■■□□□ 1.74
RNF39-202ENST00000376751 DDB1Q16531 1140 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 TAF7LQ5H9L4 462 aa25.91■■□□□ 1.74
RNF39-202ENST00000376751 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.91■■□□□ 1.74
RNF39-202ENST00000376751 UBN2Q6ZU65 1347 aa25.9■■□□□ 1.74
RNF39-202ENST00000376751 CTSWP56202 376 aa25.9■■□□□ 1.74
RNF39-202ENST00000376751 DZIP3Q86Y13 1208 aaKnown RBP25.9■■□□□ 1.74
RNF39-202ENST00000376751 XAGE2Q96GT9 111 aa25.9■■□□□ 1.74
RNF39-202ENST00000376751 GDPD2Q9HCC8 539 aa25.9■■□□□ 1.74
RNF39-202ENST00000376751 HELLSQ9NRZ9 838 aa25.9■■□□□ 1.74
RNF39-202ENST00000376751 CYP21A2P08686 494 aa25.89■■□□□ 1.74
RNF39-202ENST00000376751 MARCH10Q8NA82 808 aaPredicted RBP25.89■■□□□ 1.74
RNF39-202ENST00000376751 ACSBG1Q96GR2 724 aa25.89■■□□□ 1.74
RNF39-202ENST00000376751 TMEM63CQ9P1W3 806 aa25.89■■□□□ 1.74
RNF39-202ENST00000376751 ITGA6P23229 1130 aa25.89■■□□□ 1.73
RNF39-202ENST00000376751 THRAP3Q9Y2W1 955 aaKnown RBP25.89■■□□□ 1.73
RNF39-202ENST00000376751 IRS4O14654 1257 aaPredicted RBP25.88■■□□□ 1.73
RNF39-202ENST00000376751 AKAP2Q9Y2D5 859 aa25.88■■□□□ 1.73
RNF39-202ENST00000376751 RIPOR2Q9Y4F9 1068 aa25.88■■□□□ 1.73
RNF39-202ENST00000376751 MAST3O60307 1309 aa25.88■■□□□ 1.73
RNF39-202ENST00000376751 RREB1Q92766 1687 aa25.88■■□□□ 1.73
RNF39-202ENST00000376751 NUTM2BA6NNL0 878 aaPredicted RBP25.87■■□□□ 1.73
RNF39-202ENST00000376751 NUTM2EB1AL46 878 aaPredicted RBP25.87■■□□□ 1.73
RNF39-202ENST00000376751 ERVV-1B6SEH8 477 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 SCARF1Q14162 830 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 KRT32Q14532 448 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 NUTM2AQ8IVF1 878 aaPredicted RBP25.87■■□□□ 1.73
RNF39-202ENST00000376751 TRMT112Q9UI30 125 aaKnown RBP25.87■■□□□ 1.73
RNF39-202ENST00000376751 SPATA31A5Q5VU36 1347 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 SPATA31A7Q8IWB4 1347 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 A0A0G2JS52 829 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 RNF113AO15541 343 aaKnown RBP25.87■■□□□ 1.73
RNF39-202ENST00000376751 F13A1P00488 732 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 TTC39AQ5SRH9 613 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 INTS5Q6P9B9 1019 aaKnown RBP25.87■■□□□ 1.73
RNF39-202ENST00000376751 STOX1Q6ZVD7 989 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 MTMR6Q9Y217 621 aa25.87■■□□□ 1.73
RNF39-202ENST00000376751 NWD2Q9ULI1 1742 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 GADD45BO75293 160 aaPredicted RBP25.86■■□□□ 1.73
RNF39-202ENST00000376751 ANKRD1Q15327 319 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 TICAM2Q86XR7 235 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 ZNF34Q8IZ26 560 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 MYH14Q7Z406 1995 aaKnown RBP25.86■■□□□ 1.73
RNF39-202ENST00000376751 MBD3O95983 291 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 EIF5P55010 431 aaKnown RBP25.86■■□□□ 1.73
RNF39-202ENST00000376751 USP48Q86UV5 1035 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 NEK1Q96PY6 1258 aa25.86■■□□□ 1.73
RNF39-202ENST00000376751 M0R2C6 588 aa25.85■■□□□ 1.73
RNF39-202ENST00000376751 FKBP4Q02790 459 aaKnown RBP eCLIP25.85■■□□□ 1.73
RNF39-202ENST00000376751 CCDC158Q5M9N0 1113 aa25.85■■□□□ 1.73
RNF39-202ENST00000376751 GORABQ5T7V8 394 aa25.85■■□□□ 1.73
RNF39-202ENST00000376751 CNPY2Q9Y2B0 182 aa25.85■■□□□ 1.73
RNF39-202ENST00000376751 LRP5O75197 1615 aa25.85■■□□□ 1.73
RNF39-202ENST00000376751 AKAP11Q9UKA4 1901 aa25.85■■□□□ 1.73
RNF39-202ENST00000376751 MYH7P12883 1935 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 A0A0G2JLW4 131 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 METTL24Q5JXM2 366 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 DSCC1Q9BVC3 393 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 ATP2B3Q16720 1220 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 LDHAL6AQ6ZMR3 332 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 TMEM87AQ8NBN3 555 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 CCDC87Q9NVE4 849 aa25.84■■□□□ 1.73
RNF39-202ENST00000376751 CICQ96RK0 1608 aaPredicted RBP25.83■■□□□ 1.73
RNF39-202ENST00000376751 ANKRD18BA2A2Z9 1011 aa25.83■■□□□ 1.73
RNF39-202ENST00000376751 CRKLP46109 303 aaKnown RBP25.83■■□□□ 1.73
RNF39-202ENST00000376751 PI16Q6UXB8 463 aa25.83■■□□□ 1.73
RNF39-202ENST00000376751 PDE8AO60658 829 aa25.82■■□□□ 1.72
RNF39-202ENST00000376751 ITPK1Q13572 414 aa25.82■■□□□ 1.72
RNF39-202ENST00000376751 VGLL2Q8N8G2 317 aa25.82■■□□□ 1.72
RNF39-202ENST00000376751 OSBP2Q969R2 916 aa25.82■■□□□ 1.72
RNF39-202ENST00000376751 HSPD1P10809 573 aaKnown RBP25.82■■□□□ 1.72
RNF39-202ENST00000376751 ZAP70P43403 619 aa25.82■■□□□ 1.72
RNF39-202ENST00000376751 ATP6V1AP38606 617 aa25.81■■□□□ 1.72
RNF39-202ENST00000376751 STK3Q13188 491 aa25.81■■□□□ 1.72
RNF39-202ENST00000376751 LOC102724428A0A0B4J2F2 783 aa25.8■■□□□ 1.72
RNF39-202ENST00000376751 SIK1P57059 783 aa25.8■■□□□ 1.72
RNF39-202ENST00000376751 Q6ZUG5 572 aa25.8■■□□□ 1.72
RNF39-202ENST00000376751 CNNM1Q9NRU3 951 aa25.8■■□□□ 1.72
RNF39-202ENST00000376751 ABCC12Q96J65 1359 aa25.79■■□□□ 1.72
RNF39-202ENST00000376751 VPS37CA5D8V6 355 aaPredicted RBP25.79■■□□□ 1.72
RNF39-202ENST00000376751 LRRC2Q9BYS8 371 aa25.79■■□□□ 1.72
RNF39-202ENST00000376751 SYCE3A1L190 88 aa25.78■■□□□ 1.72
RNF39-202ENST00000376751 FOXP2O15409 715 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms