RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ST18O60284 1047 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 IFIT1P09914 478 aaKnown RBP21.36■■□□□ 1.01
CTTN-203ENST00000376561 NBR1Q14596 966 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 CCDC158Q5M9N0 1113 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 SEC31BQ9NQW1 1179 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 C4AP0C0L4 1744 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 PDE8BO95263 885 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 RBM6P78332 1123 aaKnown RBP21.36■■□□□ 1.01
CTTN-203ENST00000376561 ERFEQ4G0M1 354 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 GORABQ5T7V8 394 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
CTTN-203ENST00000376561 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 PAG1Q9NWQ8 432 aa21.36■■□□□ 1.01
CTTN-203ENST00000376561 TRIM37O94972 964 aa21.35■■□□□ 1.01
CTTN-203ENST00000376561 PTH1RQ03431 593 aa21.35■■□□□ 1.01
CTTN-203ENST00000376561 MROH5Q6ZUA9 1318 aa21.35■■□□□ 1.01
CTTN-203ENST00000376561 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 SPEF2Q9C093 1822 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 GOLIM4O00461 696 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 TTC39AQ5SRH9 613 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 SETDB2Q96T68 719 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 CCDC171Q6TFL3 1326 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 MED23Q9ULK4 1368 aa21.34■■□□□ 1.01
CTTN-203ENST00000376561 TRAPPC3LQ5T215 181 aa21.33■■□□□ 1.01
CTTN-203ENST00000376561 MPHOSPH8Q99549 860 aa21.33■■□□□ 1.01
CTTN-203ENST00000376561 ABCC12Q96J65 1359 aa21.33■■□□□ 1
CTTN-203ENST00000376561 PHF14O94880 888 aa21.32■■□□□ 1
CTTN-203ENST00000376561 RFC4P35249 363 aa21.32■■□□□ 1
CTTN-203ENST00000376561 NEK4P51957 841 aa21.32■■□□□ 1
CTTN-203ENST00000376561 SLC27A3Q5K4L6 730 aa21.32■■□□□ 1
CTTN-203ENST00000376561 NYXQ9GZU5 481 aa21.32■■□□□ 1
CTTN-203ENST00000376561 CASZ1Q86V15 1759 aa21.32■■□□□ 1
CTTN-203ENST00000376561 GTF2E1P29083 439 aaPredicted RBP21.32■■□□□ 1
CTTN-203ENST00000376561 SF3B3Q15393 1217 aaKnown RBP21.32■■□□□ 1
CTTN-203ENST00000376561 SLC10A5Q5PT55 438 aa21.32■■□□□ 1
CTTN-203ENST00000376561 TICAM2Q86XR7 235 aa21.32■■□□□ 1
CTTN-203ENST00000376561 IGHMBP2P38935 993 aaKnown RBP21.31■■□□□ 1
CTTN-203ENST00000376561 SNX14Q9Y5W7 946 aa21.31■■□□□ 1
CTTN-203ENST00000376561 PUM3Q15397 648 aaKnown RBP21.31■■□□□ 1
CTTN-203ENST00000376561 ZNF589Q86UQ0 364 aaPredicted RBP21.31■■□□□ 1
CTTN-203ENST00000376561 MAP4K1Q92918 833 aa21.31■■□□□ 1
CTTN-203ENST00000376561 UBR3Q6ZT12 1888 aa21.3■■□□□ 1
CTTN-203ENST00000376561 CHGBP05060 677 aa21.3■■□□□ 1
CTTN-203ENST00000376561 HSP90AA1P07900 732 aaKnown RBP21.3■■□□□ 1
CTTN-203ENST00000376561 C3orf67Q6ZVT6 689 aa21.3■■□□□ 1
CTTN-203ENST00000376561 HELBQ8NG08 1087 aaPredicted RBP21.3■■□□□ 1
CTTN-203ENST00000376561 ADRA2BP18089 450 aa21.29■■□□□ 1
CTTN-203ENST00000376561 FGFR2P21802 821 aa21.29■■□□□ 1
CTTN-203ENST00000376561 FKBP4Q02790 459 aaKnown RBP eCLIP21.29■■□□□ 1
CTTN-203ENST00000376561 NBPF5PQ86XG9 351 aaPredicted RBP21.29■■□□□ 1
CTTN-203ENST00000376561 RASEFQ8IZ41 740 aa21.29■■□□□ 1
CTTN-203ENST00000376561 LPIN2Q92539 896 aa21.29■■□□□ 1
CTTN-203ENST00000376561 CDC5LQ99459 802 aaKnown RBP21.29■■□□□ 1
CTTN-203ENST00000376561 DDIT3P35638 169 aa21.29■■□□□ 1
CTTN-203ENST00000376561 SCARF1Q14162 830 aa21.29■■□□□ 1
CTTN-203ENST00000376561 NECTIN1Q15223 517 aa21.29■■□□□ 1
CTTN-203ENST00000376561 ARAP2Q8WZ64 1704 aa21.29■■□□□ 1
CTTN-203ENST00000376561 TPTE2Q6XPS3 522 aa21.28■■□□□ 1
CTTN-203ENST00000376561 ZNF512BQ96KM6 892 aaPredicted RBP21.28■■□□□ 1
CTTN-203ENST00000376561 CHMP5Q9NZZ3 219 aa21.28■■□□□ 1
CTTN-203ENST00000376561 RBM8AQ9Y5S9 174 aaKnown RBP21.28■■□□□ 1
CTTN-203ENST00000376561 COL4A1P02462 1669 aa21.28■■□□□ 1
CTTN-203ENST00000376561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.28■■□□□ 1
CTTN-203ENST00000376561 NFKBIBQ15653 356 aa21.28■■□□□ 1
CTTN-203ENST00000376561 MCMDC2Q4G0Z9 681 aa21.28■■□□□ 1
CTTN-203ENST00000376561 KCNB2Q92953 911 aa21.28■■□□□ 1
CTTN-203ENST00000376561 UPF3BQ9BZI7 483 aaKnown RBP21.28■■□□□ 1
CTTN-203ENST00000376561 AKAP11Q9UKA4 1901 aa21.27■■□□□ 1
CTTN-203ENST00000376561 TAF5LO75529 589 aa21.27■■□□□ 1
CTTN-203ENST00000376561 PRPF40BQ6NWY9 871 aaKnown RBP21.27■■□□□ 1
CTTN-203ENST00000376561 IL27Q8NEV9 243 aa21.27■■□□□ 1
CTTN-203ENST00000376561 SEC62Q99442 399 aaKnown RBP21.27■■□□□ 1
CTTN-203ENST00000376561 MCM2P49736 904 aa21.27■□□□□ 0.99
CTTN-203ENST00000376561 ZAP70P43403 619 aa21.26■□□□□ 0.99
CTTN-203ENST00000376561 KCNJ4P48050 445 aa21.26■□□□□ 0.99
CTTN-203ENST00000376561 FOXD4L1Q9NU39 408 aa21.26■□□□□ 0.99
CTTN-203ENST00000376561 SLC5A1P13866 664 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 MCAMP43121 646 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 CCDC102BQ68D86 513 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 ANKRD18AQ8IVF6 992 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 NLRP3Q96P20 1036 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 HELLSQ9NRZ9 838 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 TAF1P21675 1872 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 ZMYM1Q5SVZ6 1142 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 CREB3L3Q68CJ9 461 aa21.25■□□□□ 0.99
CTTN-203ENST00000376561 RNF113AO15541 343 aaKnown RBP21.24■□□□□ 0.99
CTTN-203ENST00000376561 SSFA2P28290 1259 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 PHKA1P46020 1223 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 CHRNDQ07001 517 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 TXNRD1Q16881 649 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 PI16Q6UXB8 463 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 CCDC129Q6ZRS4 1044 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 PROM2Q8N271 834 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 SNAP23O00161 211 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 ZKSCAN1P17029 563 aaPredicted RBP21.24■□□□□ 0.99
CTTN-203ENST00000376561 ARID4AP29374 1257 aaPredicted RBP21.24■□□□□ 0.99
CTTN-203ENST00000376561 NFIXQ14938 502 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 SLFNL1Q499Z3 407 aa21.24■□□□□ 0.99
CTTN-203ENST00000376561 RXRBP28702 533 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms