RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 COL23A1Q86Y22 540 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 PNPLA7Q6ZV29 1317 aa17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 HCLS1P14317 486 aaPredicted RBP17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 CCT4P50991 539 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
CCHCR1-201ENST00000376266 GPTP24298 496 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 GTF2E1P29083 439 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 TPRNQ4KMQ1 711 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 TAF3Q5VWG9 929 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 ZNF771Q7L3S4 317 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 ANKRD7Q92527 254 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 CUL4AQ13619 759 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 CCDC183Q5T5S1 534 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 LINS1Q8NG48 757 aa17.93■□□□□ 0.46
CCHCR1-201ENST00000376266 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
CCHCR1-201ENST00000376266 KDM4AO75164 1064 aa17.92■□□□□ 0.46
CCHCR1-201ENST00000376266 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 NUP98P52948 1817 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 NEURL1BA8MQ27 555 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 KIAA1524Q8TCG1 905 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 INTS4Q96HW7 963 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 FEZ1Q99689 392 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 ZNF652Q9Y2D9 606 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 CLEC4GQ6UXB4 293 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
CCHCR1-201ENST00000376266 GYS1P13807 737 aa17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 HSP90AB3PQ58FF7 597 aa17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 ISCA1Q9BUE6 129 aa17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 PDE4CQ08493 712 aa17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 BCORQ6W2J9 1755 aa17.9■□□□□ 0.46
CCHCR1-201ENST00000376266 MX1P20591 662 aa17.89■□□□□ 0.46
CCHCR1-201ENST00000376266 ZNF34Q8IZ26 560 aa17.89■□□□□ 0.46
CCHCR1-201ENST00000376266 MEIS3Q99687 375 aa17.89■□□□□ 0.46
CCHCR1-201ENST00000376266 OGFRQ9NZT2 677 aa17.89■□□□□ 0.46
CCHCR1-201ENST00000376266 CGNQ9P2M7 1197 aaKnown RBP17.89■□□□□ 0.46
CCHCR1-201ENST00000376266 PYCARDQ9ULZ3 195 aa17.89■□□□□ 0.46
CCHCR1-201ENST00000376266 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
CCHCR1-201ENST00000376266 WDR33Q9C0J8 1336 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-201ENST00000376266 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
CCHCR1-201ENST00000376266 ALDH1L1O75891 902 aa17.89■□□□□ 0.45
CCHCR1-201ENST00000376266 RPAP2Q8IXW5 612 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-201ENST00000376266 USP44Q9H0E7 712 aa17.89■□□□□ 0.45
CCHCR1-201ENST00000376266 CTIFO43310 598 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 MCCP23508 829 aa17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 GCKRQ14397 625 aa17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 TCHHQ07283 1943 aa17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 TPM3P06753 285 aa17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 NLRP10Q86W26 655 aa17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-201ENST00000376266 NBPF7P0C2Y1 421 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-201ENST00000376266 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-201ENST00000376266 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
CCHCR1-201ENST00000376266 C9orf78Q9NZ63 289 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-201ENST00000376266 R3HDM1Q15032 1099 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-201ENST00000376266 KCNF1Q9H3M0 494 aa17.87■□□□□ 0.45
CCHCR1-201ENST00000376266 CEP85Q6P2H3 762 aa17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 SPC24Q8NBT2 197 aa17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 N4BP2Q86UW6 1770 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 RGL2O15211 777 aa17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 TMEM51Q9NW97 253 aa17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-201ENST00000376266 GRM8O00222 908 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 NFIXQ14938 502 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 GOLGA6L6A8MZA4 724 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 CNPY2Q9Y2B0 182 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 UBE3BQ7Z3V4 1068 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
CCHCR1-201ENST00000376266 PSDA5PKW4 1024 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-201ENST00000376266 TMEM87AQ8NBN3 555 aa17.84■□□□□ 0.45
CCHCR1-201ENST00000376266 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-201ENST00000376266 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
CCHCR1-201ENST00000376266 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 GABPB1Q06547 395 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 NCBP1Q09161 790 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 PARP10Q53GL7 1025 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 ESYT1Q9BSJ8 1104 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 AP5Z1O43299 807 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 TM4SF1P30408 202 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 PDE1AP54750 535 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms