RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 GJB2P29033 226 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 CERKQ8TCT0 537 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 RAD50Q92878 1312 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 TOM1O60784 492 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 KCNJ4P48050 445 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 UBE3BQ7Z3V4 1068 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 CBX8Q9HC52 389 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 TMOD3Q9NYL9 352 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 PAXBP1Q9Y5B6 917 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
MSH5-204ENST00000375755 LIG1P18858 919 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 CDK11BP21127 795 aaKnown RBP15.25■□□□□ 0.03
MSH5-204ENST00000375755 NEXNQ0ZGT2 675 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 MAP3K11Q16584 847 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 PI4K2BQ8TCG2 481 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 SYTL4Q96C24 671 aaPredicted RBP15.25■□□□□ 0.03
MSH5-204ENST00000375755 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
MSH5-204ENST00000375755 ZNF75DP51815 510 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
MSH5-204ENST00000375755 MTX1Q13505 466 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 UTYO14607 1347 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 SASH1O94885 1247 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 TPD52L1Q16890 204 aaPredicted RBP15.25■□□□□ 0.03
MSH5-204ENST00000375755 KMT5BQ4FZB7 885 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 CKAP2LQ8IYA6 745 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 KRT222Q8N1A0 295 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 KIF1BPQ96EK5 621 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 NUP62CLQ9H1M0 184 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 ITGB4P16144 1822 aa15.25■□□□□ 0.03
MSH5-204ENST00000375755 PAPPAQ13219 1627 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 ANO6Q4KMQ2 910 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 TTC6Q86TZ1 520 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 CACTINQ8WUQ7 758 aaKnown RBP15.24■□□□□ 0.03
MSH5-204ENST00000375755 TRIM5Q9C035 493 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
MSH5-204ENST00000375755 SGSM2O43147 1006 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 DNAJC10Q8IXB1 793 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 ZNF592Q92610 1267 aa15.24■□□□□ 0.03
MSH5-204ENST00000375755 LSG1Q9H089 658 aaKnown RBP15.24■□□□□ 0.03
MSH5-204ENST00000375755 TLR7Q9NYK1 1049 aaKnown RBP15.24■□□□□ 0.03
MSH5-204ENST00000375755 COL14A1Q05707 1796 aaKnown RBP15.23■□□□□ 0.03
MSH5-204ENST00000375755 A0A0G2JS52 829 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 A0A087WZG4 1122 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
MSH5-204ENST00000375755 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
MSH5-204ENST00000375755 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 CCDC144BQ3MJ40 725 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 CEP135Q66GS9 1140 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
MSH5-204ENST00000375755 ZNF397Q8NF99 534 aaPredicted RBP15.23■□□□□ 0.03
MSH5-204ENST00000375755 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
MSH5-204ENST00000375755 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 ZNF215Q9UL58 517 aaPredicted RBP15.22■□□□□ 0.03
MSH5-204ENST00000375755 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
MSH5-204ENST00000375755 ST3GAL1Q11201 340 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 FAM173BQ6P4H8 233 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 FAM53CQ9NYF3 392 aa15.22■□□□□ 0.03
MSH5-204ENST00000375755 TNS2Q63HR2 1409 aa15.21■□□□□ 0.03
MSH5-204ENST00000375755 AOX1Q06278 1338 aa15.21■□□□□ 0.03
MSH5-204ENST00000375755 USP27XA6NNY8 438 aa15.21■□□□□ 0.03
MSH5-204ENST00000375755 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
MSH5-204ENST00000375755 ST7Q9NRC1 585 aa15.21■□□□□ 0.03
MSH5-204ENST00000375755 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.2■□□□□ 0.02
MSH5-204ENST00000375755 TNMDQ9H2S6 317 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 DACT1Q9NYF0 836 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 CLIP2Q9UDT6 1046 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 ERICH4A6NGS2 130 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 FBXO38Q6PIJ6 1188 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 AACSQ86V21 672 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 TDRD7Q8NHU6 1098 aaKnown RBP15.2■□□□□ 0.02
MSH5-204ENST00000375755 ACSBG1Q96GR2 724 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 PLCH1Q4KWH8 1693 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 CASP7P55210 303 aa15.2■□□□□ 0.02
MSH5-204ENST00000375755 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
MSH5-204ENST00000375755 NUP188Q5SRE5 1749 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 EXOC5O00471 708 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 EP400Q96L91 3159 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.19■□□□□ 0.02
MSH5-204ENST00000375755 KRT85P78386 507 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 NECAB1Q8N987 351 aa15.19■□□□□ 0.02
MSH5-204ENST00000375755 ELF2Q15723 593 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
MSH5-204ENST00000375755 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
MSH5-204ENST00000375755 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
MSH5-204ENST00000375755 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSH5-204ENST00000375755 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
MSH5-204ENST00000375755 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 SYNE4Q8N205 404 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms