RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ANKRD36CQ5JPF3 1778 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 NRAPQ86VF7 1730 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 PRIM1P49642 420 aaKnown RBP9.79□□□□□ -0.84
UBR4-202ENST00000375224 CCDC158Q5M9N0 1113 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 UTP14CQ5TAP6 766 aaKnown RBP9.79□□□□□ -0.84
UBR4-202ENST00000375224 PAG1Q9NWQ8 432 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 SH3TC1Q8TE82 1336 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 NWD2Q9ULI1 1742 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 TOM1O60784 492 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 TAF5LO75529 589 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 PKP1Q13835 747 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 USPL1Q5W0Q7 1092 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 BLOC1S2Q6QNY1 142 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 NLRP10Q86W26 655 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 SMC3Q9UQE7 1217 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 A0A1B0GUL7 405 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 ADAMTS2O95450 1211 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 APPP05067 770 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
UBR4-202ENST00000375224 LRRC24Q50LG9 513 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 AK7Q96M32 723 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 LMBRD1Q9NUN5 540 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 TMEM51Q9NW97 253 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 RPAP1Q9BWH6 1393 aaPredicted RBP9.78□□□□□ -0.84
UBR4-202ENST00000375224 DOT1LQ8TEK3 1739 aa9.78□□□□□ -0.84
UBR4-202ENST00000375224 ABCC12Q96J65 1359 aa9.77□□□□□ -0.84
UBR4-202ENST00000375224 GORABQ5T7V8 394 aa9.77□□□□□ -0.84
UBR4-202ENST00000375224 BARGINQ6ZT62 677 aa9.77□□□□□ -0.84
UBR4-202ENST00000375224 FAM89AQ96GI7 184 aa9.77□□□□□ -0.84
UBR4-202ENST00000375224 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.84
UBR4-202ENST00000375224 TIMM10P62072 90 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 TAF3Q5VWG9 929 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
UBR4-202ENST00000375224 SLC4A9Q96Q91 983 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 ZBTB1Q9Y2K1 713 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 ATP6V1DQ9Y5K8 247 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 ANKRD18BA2A2Z9 1011 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 HSP90B1P14625 803 aaKnown RBP9.77□□□□□ -0.85
UBR4-202ENST00000375224 ADCK5Q3MIX3 580 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 SPATA31A5Q5VU36 1347 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 SPATA31A7Q8IWB4 1347 aa9.77□□□□□ -0.85
UBR4-202ENST00000375224 MBD3O95983 291 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 HLFQ16534 295 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 TTC39AQ5SRH9 613 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 ZNF589Q86UQ0 364 aaPredicted RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 EDC3Q96F86 508 aaKnown RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 TRMT112Q9UI30 125 aaKnown RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 NUP98P52948 1817 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 GOLIM4O00461 696 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 PDE8AO60658 829 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 CTSWP56202 376 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 MYH3P11055 1940 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 IRS4O14654 1257 aaPredicted RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 ZFYP08048 801 aaPredicted RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 RPS6KB1P23443 525 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 DSCC1Q9BVC3 393 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 PUS3Q9BZE2 481 aaKnown RBP9.76□□□□□ -0.85
UBR4-202ENST00000375224 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
UBR4-202ENST00000375224 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.75□□□□□ -0.85
UBR4-202ENST00000375224 RNF113AO15541 343 aaKnown RBP9.75□□□□□ -0.85
UBR4-202ENST00000375224 KIF20AO95235 890 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 HMGB1P09429 215 aaKnown RBP9.75□□□□□ -0.85
UBR4-202ENST00000375224 GPTP24298 496 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 DMTNQ08495 405 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 TTLL11Q8NHH1 800 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 EIF5P55010 431 aaKnown RBP9.75□□□□□ -0.85
UBR4-202ENST00000375224 ZMYM1Q5SVZ6 1142 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 ZNF34Q8IZ26 560 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
UBR4-202ENST00000375224 ITGA6P23229 1130 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 ATP6V1AP38606 617 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 METTL24Q5JXM2 366 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 LDHAL6AQ6ZMR3 332 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 XAGE2Q96GT9 111 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 GRPEL1Q9HAV7 217 aa9.75□□□□□ -0.85
UBR4-202ENST00000375224 CICQ96RK0 1608 aaPredicted RBP9.74□□□□□ -0.85
UBR4-202ENST00000375224 SLIT2O94813 1529 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 NUTM2BA6NNL0 878 aaPredicted RBP9.74□□□□□ -0.85
UBR4-202ENST00000375224 NUTM2EB1AL46 878 aaPredicted RBP9.74□□□□□ -0.85
UBR4-202ENST00000375224 STX6O43752 255 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 ZSCAN22P10073 491 aaPredicted RBP9.74□□□□□ -0.85
UBR4-202ENST00000375224 CPA1P15085 419 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 PARP10Q53GL7 1025 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 NUTM2AQ8IVF1 878 aaPredicted RBP9.74□□□□□ -0.85
UBR4-202ENST00000375224 CNPY4Q8N129 248 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 NEK1Q96PY6 1258 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 CNNM1Q9NRU3 951 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 RIPOR2Q9Y4F9 1068 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 XRCC6P12956 609 aaKnown RBP eCLIP9.74□□□□□ -0.858e-6■■□□□ 12.6
UBR4-202ENST00000375224 PDCP20941 246 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 ATP2B3Q16720 1220 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 CCDC83Q8IWF9 413 aa9.74□□□□□ -0.85
UBR4-202ENST00000375224 LOC102724428A0A0B4J2F2 783 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 SIK1P57059 783 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
UBR4-202ENST00000375224 MARCH10Q8NA82 808 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms