RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 DTNBO60941 627 aa16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 IDI1Q13907 227 aa16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 CCDC152Q4G0S7 254 aa16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 SYKP43405 635 aa16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 GPATCH11Q8N954 259 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 ANO6Q4KMQ2 910 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 DHX58Q96C10 678 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 FSD2A1L4K1 749 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 CAPZA3Q96KX2 299 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 SAP30BPQ9UHR5 308 aaKnown RBP16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 MSH6P52701 1360 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 CCDC175P0C221 793 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 SMARCC1Q92922 1105 aaPredicted RBP16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 NAPAP54920 295 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 UBASH3AP57075 661 aa16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 ZHX1Q9UKY1 873 aaPredicted RBP16.81■□□□□ 0.28
NOTCH4-201ENST00000375023 EEF2P13639 858 aaKnown RBP16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 KRT13P13646 458 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 STX17P56962 302 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 CEP135Q66GS9 1140 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 GPIHBP1Q8IV16 184 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 CCDC102BQ68D86 513 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 DDB1Q16531 1140 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 PLEKHH2Q8IVE3 1493 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 ZBTB43O43298 467 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 MCM5P33992 734 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 ZSCAN23Q3MJ62 389 aa16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
NOTCH4-201ENST00000375023 SNRPA1P09661 255 aaKnown RBP16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 AKR1B10O60218 316 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 SDSP20132 328 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 SLC9C2Q5TAH2 1124 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 LDHCP07864 332 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 RTN1Q16799 776 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 NOS1P29475 1434 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 CTAGE5O15320 804 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 MCM7P33993 719 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 FAM98CQ17RN3 349 aaKnown RBP16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 FNBP4Q8N3X1 1017 aaPredicted RBP16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 PTPRCP08575 1304 aa16.79■□□□□ 0.28
NOTCH4-201ENST00000375023 LPXNO60711 386 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 LMBR1LQ6UX01 489 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 IKBKGQ9Y6K9 419 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 SKIV2LQ15477 1246 aaKnown RBP16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 GSTA5Q7RTV2 222 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 MAGEB6Q8N7X4 407 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 SSX2IPQ9Y2D8 614 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 ASIC1P78348 528 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 AOPEPQ8N6M6 819 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 SMARCC2Q8TAQ2 1214 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 CCDC50Q8IVM0 306 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 TBC1D5Q92609 795 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 DDX19AQ9NUU7 478 aaKnown RBP16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 HARSP12081 509 aaKnown RBP16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 CCDC63Q8NA47 563 aa16.78■□□□□ 0.28
NOTCH4-201ENST00000375023 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
NOTCH4-201ENST00000375023 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.28
NOTCH4-201ENST00000375023 KIAA0753Q2KHM9 967 aa16.77■□□□□ 0.28
NOTCH4-201ENST00000375023 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
NOTCH4-201ENST00000375023 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
NOTCH4-201ENST00000375023 MXRA7P84157 204 aa16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 SPAG5Q96R06 1193 aa16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 ABT1Q9ULW3 272 aaKnown RBP16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 USP48Q86UV5 1035 aa16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 TTC30AQ86WT1 665 aa16.77■□□□□ 0.27
NOTCH4-201ENST00000375023 SORBS3O60504 671 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 ACTN2P35609 894 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 TNNI2P48788 182 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 NAA15Q9BXJ9 866 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 UTP14AQ9BVJ6 771 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 MAGEB6P1A0A0J9YX57 407 aa16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 KARSQ15046 597 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 DNAJC21Q5F1R6 531 aaKnown RBP16.76■□□□□ 0.27
NOTCH4-201ENST00000375023 PIK3R4Q99570 1358 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms