RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 BRPF1P55201 1214 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQA1-202ENST00000374949 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
HLA-DQA1-202ENST00000374949 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
HLA-DQA1-202ENST00000374949 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
HLA-DQA1-202ENST00000374949 SH3TC1Q8TE82 1336 aa13.88□□□□□ -0.19
HLA-DQA1-202ENST00000374949 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
HLA-DQA1-202ENST00000374949 MS4A1P11836 297 aa13.87□□□□□ -0.19
HLA-DQA1-202ENST00000374949 MAP2K2P36507 400 aa13.87□□□□□ -0.19
HLA-DQA1-202ENST00000374949 PDE3AQ14432 1141 aa13.87□□□□□ -0.19
HLA-DQA1-202ENST00000374949 TNIP1Q15025 636 aa13.87□□□□□ -0.19
HLA-DQA1-202ENST00000374949 CHMP4AQ9BY43 222 aa13.87□□□□□ -0.19
HLA-DQA1-202ENST00000374949 TCIRG1Q13488 830 aa13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 DLK2Q6UY11 383 aa13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 MICALL2Q8IY33 904 aa13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 PGAP2Q9UHJ9 254 aa13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQA1-202ENST00000374949 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
HLA-DQA1-202ENST00000374949 CDC37L1Q7L3B6 337 aa13.85□□□□□ -0.19
HLA-DQA1-202ENST00000374949 ZC3H15Q8WU90 426 aaKnown RBP13.85□□□□□ -0.19
HLA-DQA1-202ENST00000374949 DBNDD1Q9H9R9 158 aa13.85□□□□□ -0.19
HLA-DQA1-202ENST00000374949 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
HLA-DQA1-202ENST00000374949 POLR2AP24928 1970 aaKnown RBP13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 CA12O43570 354 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 HOXB7P09629 217 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 SAMD7Q7Z3H4 446 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 EXOC6Q8TAG9 804 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 ARHGAP45Q92619 1136 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 HHIPL1Q96JK4 782 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 ZIC5Q96T25 663 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 MCOLN1Q9GZU1 580 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
HLA-DQA1-202ENST00000374949 H7C1D1 291 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 PSMD14O00487 310 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 EGFRP00533 1210 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 HUNKP57058 714 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 MLLT1Q03111 559 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 CCDC30Q5VVM6 783 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 TMC4Q7Z404 712 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 FAM89AQ96GI7 184 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ADM5C9JUS6 153 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 SLC34A2O95436 690 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 GPSM2P81274 684 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 WASHC4Q2M389 1173 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ATF7IPQ6VMQ6 1270 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 NSFL1CQ9UNZ2 370 aaKnown RBP13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 RTL9Q8NET4 1388 aa13.82□□□□□ -0.2
HLA-DQA1-202ENST00000374949 C6orf229H3BNL8 230 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ECE2O60344 883 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 NOGQ13253 232 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 DGKZQ13574 1117 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 PLBD2Q8NHP8 589 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 POLLQ9UGP5 575 aa13.81□□□□□ -0.2
HLA-DQA1-202ENST00000374949 RBM26Q5T8P6 1007 aaKnown RBP13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 DPF2Q92785 391 aa13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 PSME4Q14997 1843 aa13.8□□□□□ -0.2
HLA-DQA1-202ENST00000374949 FAM155AB1AL88 458 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 TRIM27P14373 513 aa13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 RGS19P49795 217 aa13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 GBA2Q9HCG7 927 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ASTN2O75129 1339 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQA1-202ENST00000374949 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 KIF4BQ2VIQ3 1234 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 RGMBQ6NW40 437 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 ANKRD13DQ6ZTN6 518 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 TBC1D16Q8TBP0 767 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 GGA3Q9NZ52 723 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 TNNQ9UQP3 1299 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 COG6Q9Y2V7 657 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 SPEF2Q9C093 1822 aa13.78□□□□□ -0.2
HLA-DQA1-202ENST00000374949 IRS4O14654 1257 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQA1-202ENST00000374949 PTPRCP08575 1304 aa13.77□□□□□ -0.21
HLA-DQA1-202ENST00000374949 RLBP1P12271 317 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms