RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 UBR2Q8IWV8 1755 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 ROBO1Q9Y6N7 1651 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 GADD45BO75293 160 aaPredicted RBP21.8■■□□□ 1.08
RXRB-202ENST00000374685 ITGA6P23229 1130 aa21.8■■□□□ 1.08
RXRB-202ENST00000374685 PSMA5P28066 241 aa21.8■■□□□ 1.08
RXRB-202ENST00000374685 HELBQ8NG08 1087 aaPredicted RBP21.8■■□□□ 1.08
RXRB-202ENST00000374685 STX6O43752 255 aa21.8■■□□□ 1.08
RXRB-202ENST00000374685 FERMT3Q86UX7 667 aa21.8■■□□□ 1.08
RXRB-202ENST00000374685 XAGE2Q96GT9 111 aa21.8■■□□□ 1.08
RXRB-202ENST00000374685 PRDM4Q9UKN5 801 aa21.8■■□□□ 1.08
RXRB-202ENST00000374685 RPAP1Q9BWH6 1393 aaPredicted RBP21.8■■□□□ 1.08
RXRB-202ENST00000374685 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
RXRB-202ENST00000374685 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
RXRB-202ENST00000374685 HSP90B1P14625 803 aaKnown RBP21.79■■□□□ 1.08
RXRB-202ENST00000374685 ATP6V1AP38606 617 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 SCARF1Q14162 830 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 WASHC4Q2M389 1173 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 CNPY2Q9Y2B0 182 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 BCL9O00512 1426 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 FIBPO43427 364 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 HCLS1P14317 486 aaPredicted RBP21.79■■□□□ 1.08
RXRB-202ENST00000374685 ST3GAL1Q11201 340 aa21.79■■□□□ 1.08
RXRB-202ENST00000374685 SYCE3A1L190 88 aa21.78■■□□□ 1.08
RXRB-202ENST00000374685 CYP21A2P08686 494 aa21.78■■□□□ 1.08
RXRB-202ENST00000374685 TMEM63CQ9P1W3 806 aa21.78■■□□□ 1.08
RXRB-202ENST00000374685 CCDC158Q5M9N0 1113 aa21.78■■□□□ 1.08
RXRB-202ENST00000374685 CHST3Q7LGC8 479 aa21.78■■□□□ 1.08
RXRB-202ENST00000374685 TM6SF1Q9BZW5 370 aa21.78■■□□□ 1.08
RXRB-202ENST00000374685 SNAP23O00161 211 aa21.77■■□□□ 1.08
RXRB-202ENST00000374685 FOSBP53539 338 aa21.77■■□□□ 1.08
RXRB-202ENST00000374685 SMIM5Q71RC9 77 aa21.77■■□□□ 1.08
RXRB-202ENST00000374685 USP48Q86UV5 1035 aa21.77■■□□□ 1.08
RXRB-202ENST00000374685 KCNQ2O43526 872 aa21.77■■□□□ 1.08
RXRB-202ENST00000374685 RPS6KB1P23443 525 aa21.77■■□□□ 1.08
RXRB-202ENST00000374685 TTLL11Q8NHH1 800 aa21.76■■□□□ 1.07
RXRB-202ENST00000374685 ZSCAN22P10073 491 aaPredicted RBP21.76■■□□□ 1.07
RXRB-202ENST00000374685 MARCH10Q8NA82 808 aaPredicted RBP21.76■■□□□ 1.07
RXRB-202ENST00000374685 NUP188Q5SRE5 1749 aa21.76■■□□□ 1.07
RXRB-202ENST00000374685 FAM173BQ6P4H8 233 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 NEK1Q96PY6 1258 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 TJP1Q07157 1748 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 ZAP70P43403 619 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 HAND2P61296 217 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 TTLL5Q6EMB2 1281 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 KCNB2Q92953 911 aa21.75■■□□□ 1.07
RXRB-202ENST00000374685 DISP2A7MBM2 1401 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 UBN2Q6ZU65 1347 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 CTSWP56202 376 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 RBM10P98175 930 aaKnown RBP21.74■■□□□ 1.07
RXRB-202ENST00000374685 TOB2Q14106 344 aaPredicted RBP21.74■■□□□ 1.07
RXRB-202ENST00000374685 ATP2B3Q16720 1220 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 TAOK2Q9UL54 1235 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 ITGB4P16144 1822 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 ANKRD18BA2A2Z9 1011 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 CIAO1O76071 339 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 FAM98CQ17RN3 349 aaKnown RBP21.74■■□□□ 1.07
RXRB-202ENST00000374685 Q6ZUG5 572 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 RNF214Q8ND24 703 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 ZSCAN31Q96LW9 406 aaPredicted RBP21.74■■□□□ 1.07
RXRB-202ENST00000374685 ISY1Q9ULR0 285 aaKnown RBP21.74■■□□□ 1.07
RXRB-202ENST00000374685 PAPPAQ13219 1627 aa21.74■■□□□ 1.07
RXRB-202ENST00000374685 M0R2C6 588 aa21.73■■□□□ 1.07
RXRB-202ENST00000374685 TRIM28Q13263 835 aaKnown RBP21.73■■□□□ 1.07
RXRB-202ENST00000374685 LARP1BQ659C4 914 aaKnown RBP21.73■■□□□ 1.07
RXRB-202ENST00000374685 DDX11Q96FC9 970 aa21.73■■□□□ 1.07
RXRB-202ENST00000374685 SH2B1Q9NRF2 756 aaPredicted RBP21.73■■□□□ 1.07
RXRB-202ENST00000374685 U3KPZ7 1027 aaPredicted RBP21.73■■□□□ 1.07
RXRB-202ENST00000374685 SPATA31A1Q5TZJ5 1347 aa21.73■■□□□ 1.07
RXRB-202ENST00000374685 CRKLP46109 303 aaKnown RBP21.73■■□□□ 1.07
RXRB-202ENST00000374685 NASPP49321 788 aaPredicted RBP21.73■■□□□ 1.07
RXRB-202ENST00000374685 STOX1Q6ZVD7 989 aa21.73■■□□□ 1.07
RXRB-202ENST00000374685 BRF1Q92994 677 aa21.73■■□□□ 1.07
RXRB-202ENST00000374685 MAST3O60307 1309 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 TCHHQ07283 1943 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 DNM1Q05193 864 aaKnown RBP21.72■■□□□ 1.07
RXRB-202ENST00000374685 OSBP2Q969R2 916 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 AKAP2Q9Y2D5 859 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 F13A1P00488 732 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 C8orf37Q96NL8 207 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 GPR108Q9NPR9 543 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 HMG20BQ9P0W2 317 aa21.72■■□□□ 1.07
RXRB-202ENST00000374685 RNF113AO15541 343 aaKnown RBP21.71■■□□□ 1.07
RXRB-202ENST00000374685 FAM182BQ5T319 152 aa21.71■■□□□ 1.07
RXRB-202ENST00000374685 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
RXRB-202ENST00000374685 JAK2O60674 1132 aa21.71■■□□□ 1.07
RXRB-202ENST00000374685 CSF1RP07333 972 aa21.71■■□□□ 1.07
RXRB-202ENST00000374685 SIK1P57059 783 aa21.71■■□□□ 1.07
RXRB-202ENST00000374685 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.07
RXRB-202ENST00000374685 ITPK1Q13572 414 aa21.7■■□□□ 1.07
RXRB-202ENST00000374685 SUSD4Q5VX71 490 aa21.7■■□□□ 1.06
RXRB-202ENST00000374685 MTMR6Q9Y217 621 aa21.7■■□□□ 1.06
RXRB-202ENST00000374685 ZMYM1Q5SVZ6 1142 aa21.7■■□□□ 1.06
RXRB-202ENST00000374685 CDC37L1Q7L3B6 337 aa21.7■■□□□ 1.06
RXRB-202ENST00000374685 SEC31BQ9NQW1 1179 aa21.7■■□□□ 1.06
RXRB-202ENST00000374685 IDH1O75874 414 aaKnown RBP21.69■■□□□ 1.06
RXRB-202ENST00000374685 IL6STP40189 918 aaPredicted RBP21.69■■□□□ 1.06
RXRB-202ENST00000374685 BICDL1Q6ZP65 573 aa21.69■■□□□ 1.06
RXRB-202ENST00000374685 RBSNQ9H1K0 784 aa21.69■■□□□ 1.06
RXRB-202ENST00000374685 CCDC87Q9NVE4 849 aa21.69■■□□□ 1.06
RXRB-202ENST00000374685 COL14A1Q05707 1796 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms