RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
PTPN20-202ENST00000374339 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
PTPN20-202ENST00000374339 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
PTPN20-202ENST00000374339 ABCC12Q96J65 1359 aa11.88□□□□□ -0.51
PTPN20-202ENST00000374339 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
PTPN20-202ENST00000374339 SERPINB2P05120 415 aa11.88□□□□□ -0.51
PTPN20-202ENST00000374339 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
PTPN20-202ENST00000374339 TNNI3KQ59H18 835 aa11.88□□□□□ -0.51
PTPN20-202ENST00000374339 FPGT-TNNI3KV9GXZ4 949 aa11.88□□□□□ -0.51
PTPN20-202ENST00000374339 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
PTPN20-202ENST00000374339 SPEF2Q9C093 1822 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
PTPN20-202ENST00000374339 GLRX3O76003 335 aaKnown RBP11.87□□□□□ -0.51
PTPN20-202ENST00000374339 C8orf34Q49A92 452 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 PRR5LQ6MZQ0 368 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 EAF2Q96CJ1 260 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-202ENST00000374339 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-202ENST00000374339 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
PTPN20-202ENST00000374339 TNRC6CQ9HCJ0 1690 aaKnown RBP11.87□□□□□ -0.51
PTPN20-202ENST00000374339 ZNF609O15014 1411 aa11.86□□□□□ -0.51
PTPN20-202ENST00000374339 METTL24Q5JXM2 366 aa11.86□□□□□ -0.51
PTPN20-202ENST00000374339 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
PTPN20-202ENST00000374339 ANKRD18AQ8IVF6 992 aa11.86□□□□□ -0.51
PTPN20-202ENST00000374339 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-202ENST00000374339 PUS3Q9BZE2 481 aaKnown RBP11.86□□□□□ -0.51
PTPN20-202ENST00000374339 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
PTPN20-202ENST00000374339 AK9Q5TCS8 1911 aa11.86□□□□□ -0.51
PTPN20-202ENST00000374339 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
PTPN20-202ENST00000374339 DDR1Q08345 913 aa11.85□□□□□ -0.51
PTPN20-202ENST00000374339 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
PTPN20-202ENST00000374339 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
PTPN20-202ENST00000374339 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
PTPN20-202ENST00000374339 ARAP2Q8WZ64 1704 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 CDC45O75419 566 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 PDE8BO95263 885 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 SDSP20132 328 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
PTPN20-202ENST00000374339 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
PTPN20-202ENST00000374339 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-202ENST00000374339 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-202ENST00000374339 A0A1B0GUL7 405 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 MMP10P09238 476 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 RPS8P62241 208 aaKnown RBP11.83□□□□□ -0.52
PTPN20-202ENST00000374339 EVX2Q03828 476 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 PUM3Q15397 648 aaKnown RBP11.83□□□□□ -0.52
PTPN20-202ENST00000374339 ATP2B3Q16720 1220 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
PTPN20-202ENST00000374339 DBNLQ9UJU6 430 aaKnown RBP11.83□□□□□ -0.52
PTPN20-202ENST00000374339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-202ENST00000374339 A0A1B0GUL6 1792 aa11.83□□□□□ -0.52
PTPN20-202ENST00000374339 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-202ENST00000374339 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 ATP5JP18859 108 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 LPIN2Q92539 896 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 RBM17Q96I25 401 aaKnown RBP11.82□□□□□ -0.52
PTPN20-202ENST00000374339 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
PTPN20-202ENST00000374339 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 TAF1P21675 1872 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 ANKRD31Q8N7Z5 1873 aa11.82□□□□□ -0.52
PTPN20-202ENST00000374339 PDE6BP35913 854 aa11.81□□□□□ -0.52
PTPN20-202ENST00000374339 TIMM10P62072 90 aa11.81□□□□□ -0.52
PTPN20-202ENST00000374339 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
PTPN20-202ENST00000374339 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
PTPN20-202ENST00000374339 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
PTPN20-202ENST00000374339 DBNDD2Q9BQY9 259 aa11.81□□□□□ -0.52
PTPN20-202ENST00000374339 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
PTPN20-202ENST00000374339 SLC5A1P13866 664 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-202ENST00000374339 CHRNDQ07001 517 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 GRAPQ13588 217 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 TMC4Q7Z404 712 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-202ENST00000374339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTPN20-202ENST00000374339 EVI5LQ96CN4 794 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
PTPN20-202ENST00000374339 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
PTPN20-202ENST00000374339 UPF1Q92900 1129 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPN20-202ENST00000374339 XAGE2Q96GT9 111 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 COL4A1P02462 1669 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 HIP1O00291 1037 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 BBOX1O75936 387 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 NPR1P16066 1061 aa11.79□□□□□ -0.52
PTPN20-202ENST00000374339 FGFR2P21802 821 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms