RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 GJD4Q96KN9 370 aaPredicted RBP15.17■□□□□ 0.02
PRPF4-202ENST00000374199 ARID4AP29374 1257 aaPredicted RBP15.16■□□□□ 0.02
PRPF4-202ENST00000374199 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
PRPF4-202ENST00000374199 SYTL4Q96C24 671 aaPredicted RBP15.16■□□□□ 0.02
PRPF4-202ENST00000374199 LRRC37AA6NMS7 1700 aa15.16■□□□□ 0.02
PRPF4-202ENST00000374199 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
PRPF4-202ENST00000374199 BCL2L12Q9HB09 334 aa15.16■□□□□ 0.02
PRPF4-202ENST00000374199 PAG1Q9NWQ8 432 aa15.16■□□□□ 0.02
PRPF4-202ENST00000374199 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
PRPF4-202ENST00000374199 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 SLC27A2O14975 620 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 SSFA2P28290 1259 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 RBM8AQ9Y5S9 174 aaKnown RBP15.15■□□□□ 0.02
PRPF4-202ENST00000374199 TIMM10P62072 90 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 EDC3Q96F86 508 aaKnown RBP15.15■□□□□ 0.02
PRPF4-202ENST00000374199 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
PRPF4-202ENST00000374199 UTP14AQ9BVJ6 771 aaKnown RBP15.15■□□□□ 0.02
PRPF4-202ENST00000374199 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 ANKRD18BA2A2Z9 1011 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 NUCB2P80303 420 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 RUFY3Q7L099 469 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 PTF1AQ7RTS3 328 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 FBXL16Q8N461 479 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 DSCC1Q9BVC3 393 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 CEP126Q9P2H0 1117 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 TRMT112Q9UI30 125 aaKnown RBP15.14■□□□□ 0.01
PRPF4-202ENST00000374199 MCMDC2Q4G0Z9 681 aa15.14■□□□□ 0.01
PRPF4-202ENST00000374199 FOXP2O15409 715 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 PDE8BO95263 885 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 GPTP24298 496 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 SF3B3Q15393 1217 aaKnown RBP15.13■□□□□ 0.01
PRPF4-202ENST00000374199 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 KIAA1211Q6ZU35 1233 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 DDX11L8A8MPP1 907 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 ZGPATQ8N5A5 531 aaKnown RBP15.13■□□□□ 0.01
PRPF4-202ENST00000374199 RPS6KA4O75676 772 aa15.13■□□□□ 0.01
PRPF4-202ENST00000374199 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
PRPF4-202ENST00000374199 TAF1P21675 1872 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 ADORA1P30542 326 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 BRD1O95696 1058 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 ST3GAL1Q11201 340 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 AGXT2Q9BYV1 514 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 NARFQ9UHQ1 456 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
PRPF4-202ENST00000374199 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
PRPF4-202ENST00000374199 PTMSP20962 102 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 HSPA1LP34931 641 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 KAT6BQ8WYB5 2073 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 AFF2P51816 1311 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 AK2P54819 239 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 ZNF652Q9Y2D9 606 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 CHD4Q14839 1912 aa15.11■□□□□ 0.01
PRPF4-202ENST00000374199 QSER1Q2KHR3 1735 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 MYH13Q9UKX3 1938 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 RNF113AO15541 343 aaKnown RBP15.1■□□□□ 0.01
PRPF4-202ENST00000374199 ZFYP08048 801 aaPredicted RBP15.1■□□□□ 0.01
PRPF4-202ENST00000374199 SCARF1Q14162 830 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 GSE1Q14687 1217 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 PRPF40BQ6NWY9 871 aaKnown RBP15.1■□□□□ 0.01
PRPF4-202ENST00000374199 LIMCH1Q9UPQ0 1083 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
PRPF4-202ENST00000374199 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 MAST3O60307 1309 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 ZMYM6O95789 1325 aa15.1■□□□□ 0.01
PRPF4-202ENST00000374199 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 PUM3Q15397 648 aaKnown RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 ATP2B3Q16720 1220 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 TAF6LQ9Y6J9 622 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 CHGBP05060 677 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 MCAMP43121 646 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 COL9A3Q14050 684 aaPredicted RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 LPIN2Q92539 896 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 UPF3BQ9BZI7 483 aaKnown RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 RPS6KB1P23443 525 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 PKP1Q13835 747 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 SH2B1Q9NRF2 756 aaPredicted RBP15.09■□□□□ 0.01
PRPF4-202ENST00000374199 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
PRPF4-202ENST00000374199 IRS2Q9Y4H2 1338 aa15.08■□□□□ 0.01
PRPF4-202ENST00000374199 TCRBV5S4A2TA0A5A2 114 aa15.08■□□□□ 0.01
PRPF4-202ENST00000374199 DEKP35659 375 aaKnown RBP15.08■□□□□ 0.01
PRPF4-202ENST00000374199 KRT32Q14532 448 aa15.08■□□□□ 0.01
PRPF4-202ENST00000374199 CCDC158Q5M9N0 1113 aa15.08■□□□□ 0.01
PRPF4-202ENST00000374199 ZSCAN31Q96LW9 406 aaPredicted RBP15.08■□□□□ 0.01
PRPF4-202ENST00000374199 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0.01
PRPF4-202ENST00000374199 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0.01
PRPF4-202ENST00000374199 BAG4O95429 457 aaKnown RBP15.08■□□□□ 0
PRPF4-202ENST00000374199 TOB2Q14106 344 aaPredicted RBP15.08■□□□□ 0
PRPF4-202ENST00000374199 GBP4Q96PP9 640 aa15.08■□□□□ 0
PRPF4-202ENST00000374199 GOLIM4O00461 696 aa15.07■□□□□ 0
PRPF4-202ENST00000374199 CASTP20810 708 aaKnown RBP15.07■□□□□ 0
PRPF4-202ENST00000374199 PSMA5P28066 241 aa15.07■□□□□ 0
PRPF4-202ENST00000374199 CCDC152Q4G0S7 254 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms