RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
RBBP4-201ENST00000373485 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
RBBP4-201ENST00000373485 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
RBBP4-201ENST00000373485 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
RBBP4-201ENST00000373485 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
RBBP4-201ENST00000373485 DDX60Q8IY21 1712 aaKnown RBP11.61□□□□□ -0.55
RBBP4-201ENST00000373485 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
RBBP4-201ENST00000373485 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
RBBP4-201ENST00000373485 G3V3G9 751 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
RBBP4-201ENST00000373485 CRY2Q49AN0 593 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 ITPRIPQ8IWB1 547 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
RBBP4-201ENST00000373485 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
RBBP4-201ENST00000373485 USP44Q9H0E7 712 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 BCS1LQ9Y276 419 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
RBBP4-201ENST00000373485 GPR162Q16538 588 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
RBBP4-201ENST00000373485 STYK1Q6J9G0 422 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 SUCLG2Q96I99 432 aa11.6□□□□□ -0.55
RBBP4-201ENST00000373485 LAMB2P55268 1798 aa11.59□□□□□ -0.55
RBBP4-201ENST00000373485 MS4A1P11836 297 aa11.59□□□□□ -0.55
RBBP4-201ENST00000373485 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.551e-15■□□□□ 10.7
RBBP4-201ENST00000373485 CTSWP56202 376 aa11.59□□□□□ -0.55
RBBP4-201ENST00000373485 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
RBBP4-201ENST00000373485 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
RBBP4-201ENST00000373485 DDX46Q7L014 1031 aaKnown RBP11.59□□□□□ -0.55
RBBP4-201ENST00000373485 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
RBBP4-201ENST00000373485 MEIS3Q99687 375 aa11.59□□□□□ -0.55
RBBP4-201ENST00000373485 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
RBBP4-201ENST00000373485 UTYO14607 1347 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 UBTFL1P0CB47 393 aaPredicted RBP11.58□□□□□ -0.56
RBBP4-201ENST00000373485 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
RBBP4-201ENST00000373485 FOXO4P98177 505 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 PRPF40BQ6NWY9 871 aaKnown RBP11.58□□□□□ -0.56
RBBP4-201ENST00000373485 TTLL11Q8NHH1 800 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 PLA2G12BQ9BX93 195 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 SEC31BQ9NQW1 1179 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
RBBP4-201ENST00000373485 HOXA10P31260 410 aaPredicted RBP11.57□□□□□ -0.56
RBBP4-201ENST00000373485 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
RBBP4-201ENST00000373485 KAZALD1Q96I82 304 aa11.57□□□□□ -0.56
RBBP4-201ENST00000373485 CRAMP1Q96RY5 1269 aa11.57□□□□□ -0.56
RBBP4-201ENST00000373485 BICC1Q9H694 974 aaKnown RBP11.57□□□□□ -0.56
RBBP4-201ENST00000373485 GREM2Q9H772 168 aa11.57□□□□□ -0.56
RBBP4-201ENST00000373485 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
RBBP4-201ENST00000373485 C21orf2O43822 256 aa11.56□□□□□ -0.56
RBBP4-201ENST00000373485 PPP1R37O75864 691 aa11.56□□□□□ -0.56
RBBP4-201ENST00000373485 CSF1RP07333 972 aa11.56□□□□□ -0.56
RBBP4-201ENST00000373485 BRCA1P38398 1863 aaKnown RBP11.56□□□□□ -0.56
RBBP4-201ENST00000373485 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
RBBP4-201ENST00000373485 CELF1Q92879 486 aaKnown RBP11.56□□□□□ -0.56
RBBP4-201ENST00000373485 SUPT16HQ9Y5B9 1047 aaKnown RBP11.56□□□□□ -0.56
RBBP4-201ENST00000373485 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
RBBP4-201ENST00000373485 TAF1P21675 1872 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 SLX4Q8IY92 1834 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 GNAI3P08754 354 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 ITGA6P23229 1130 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 GRAPQ13588 217 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 PDE3AQ14432 1141 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
RBBP4-201ENST00000373485 OLFM4Q6UX06 510 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 SLC51AQ86UW1 340 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
RBBP4-201ENST00000373485 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
RBBP4-201ENST00000373485 MYH3P11055 1940 aa11.54□□□□□ -0.56
RBBP4-201ENST00000373485 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
RBBP4-201ENST00000373485 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
RBBP4-201ENST00000373485 RPS8P62241 208 aaKnown RBP11.54□□□□□ -0.56
RBBP4-201ENST00000373485 ARHGAP27Q6ZUM4 889 aa11.54□□□□□ -0.56
RBBP4-201ENST00000373485 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
RBBP4-201ENST00000373485 COL4A1P02462 1669 aa11.54□□□□□ -0.56
RBBP4-201ENST00000373485 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 BBOX1O75936 387 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 GNAI2P04899 355 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
RBBP4-201ENST00000373485 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 CDC5LQ99459 802 aaKnown RBP11.53□□□□□ -0.56
RBBP4-201ENST00000373485 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
RBBP4-201ENST00000373485 GRIN3BO60391 1043 aa11.52□□□□□ -0.56
RBBP4-201ENST00000373485 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.56
RBBP4-201ENST00000373485 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.56
RBBP4-201ENST00000373485 ZNF594Q96JF6 807 aaPredicted RBP11.52□□□□□ -0.56
RBBP4-201ENST00000373485 TMX4Q9H1E5 349 aaPredicted RBP11.52□□□□□ -0.56
RBBP4-201ENST00000373485 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.56
RBBP4-201ENST00000373485 DDX19BQ9UMR2 479 aa11.52□□□□□ -0.56
RBBP4-201ENST00000373485 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.56
RBBP4-201ENST00000373485 RTL9Q8NET4 1388 aa11.52□□□□□ -0.56
RBBP4-201ENST00000373485 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.57
RBBP4-201ENST00000373485 CCDC93Q567U6 631 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms