RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 ATP5JP18859 108 aa16.08■□□□□ 0.17
RAB40A-202ENST00000372633 SCRN1Q12765 414 aa16.08■□□□□ 0.17
RAB40A-202ENST00000372633 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.17
RAB40A-202ENST00000372633 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.17
RAB40A-202ENST00000372633 PFKFB2O60825 505 aa16.08■□□□□ 0.16
RAB40A-202ENST00000372633 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
RAB40A-202ENST00000372633 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
RAB40A-202ENST00000372633 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
RAB40A-202ENST00000372633 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
RAB40A-202ENST00000372633 ZNF592Q92610 1267 aa16.08■□□□□ 0.16
RAB40A-202ENST00000372633 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
RAB40A-202ENST00000372633 KIF2AO00139 706 aaPredicted RBP16.07■□□□□ 0.16
RAB40A-202ENST00000372633 ZNF530Q6P9A1 599 aaPredicted RBP16.07■□□□□ 0.16
RAB40A-202ENST00000372633 KRT222Q8N1A0 295 aa16.07■□□□□ 0.16
RAB40A-202ENST00000372633 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
RAB40A-202ENST00000372633 ERBB3P21860 1342 aa16.07■□□□□ 0.16
RAB40A-202ENST00000372633 TERF2Q15554 542 aa16.07■□□□□ 0.16
RAB40A-202ENST00000372633 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
RAB40A-202ENST00000372633 ZNF771Q7L3S4 317 aaPredicted RBP16.07■□□□□ 0.16
RAB40A-202ENST00000372633 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
RAB40A-202ENST00000372633 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
RAB40A-202ENST00000372633 CYP21A2P08686 494 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 GSDMDP57764 484 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
RAB40A-202ENST00000372633 BECN2A8MW95 431 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 DDX58O95786 925 aaKnown RBP16.06■□□□□ 0.16
RAB40A-202ENST00000372633 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 DDX21Q9NR30 783 aaKnown RBP eCLIP16.06■□□□□ 0.16
RAB40A-202ENST00000372633 ZNF609O15014 1411 aa16.06■□□□□ 0.16
RAB40A-202ENST00000372633 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
RAB40A-202ENST00000372633 SIL1Q9H173 461 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 IMPACTQ9P2X3 320 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 CTDNEP1O95476 244 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 CCDC73Q6ZRK6 1079 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 PXDNQ92626 1479 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
RAB40A-202ENST00000372633 HMGB1P09429 215 aaKnown RBP16.05■□□□□ 0.16
RAB40A-202ENST00000372633 PDIA6Q15084 440 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 FBXO38Q6PIJ6 1188 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 USP28Q96RU2 1077 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 SALL1Q9NSC2 1324 aa16.05■□□□□ 0.16
RAB40A-202ENST00000372633 LMTK3Q96Q04 1460 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 ABCC6O95255 1503 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
RAB40A-202ENST00000372633 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
RAB40A-202ENST00000372633 FAM193AP78312 1265 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 DBNLQ9UJU6 430 aaKnown RBP16.04■□□□□ 0.16
RAB40A-202ENST00000372633 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 KCNJ6P48051 423 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 CEP57L1Q8IYX8 460 aa16.04■□□□□ 0.16
RAB40A-202ENST00000372633 FTOQ9C0B1 505 aaKnown RBP eCLIP16.04■□□□□ 0.16
RAB40A-202ENST00000372633 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
RAB40A-202ENST00000372633 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
RAB40A-202ENST00000372633 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
RAB40A-202ENST00000372633 ZNF396Q96N95 335 aaPredicted RBP16.03■□□□□ 0.16
RAB40A-202ENST00000372633 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
RAB40A-202ENST00000372633 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
RAB40A-202ENST00000372633 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
RAB40A-202ENST00000372633 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
RAB40A-202ENST00000372633 FMR1NBQ8N0W7 255 aaPredicted RBP16.03■□□□□ 0.16
RAB40A-202ENST00000372633 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.16
RAB40A-202ENST00000372633 ELF2Q15723 593 aa16.02■□□□□ 0.16
RAB40A-202ENST00000372633 TNNI3KQ59H18 835 aa16.02■□□□□ 0.16
RAB40A-202ENST00000372633 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
RAB40A-202ENST00000372633 TRMT1Q9NXH9 659 aaKnown RBP16.02■□□□□ 0.16
RAB40A-202ENST00000372633 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.16
RAB40A-202ENST00000372633 PTPDC1A2A3K4 754 aa16.02■□□□□ 0.15
RAB40A-202ENST00000372633 RFX5P48382 616 aaPredicted RBP16.02■□□□□ 0.15
RAB40A-202ENST00000372633 EXOSC10Q01780 885 aaKnown RBP16.02■□□□□ 0.15
RAB40A-202ENST00000372633 EPHA10Q5JZY3 1008 aa16.02■□□□□ 0.15
RAB40A-202ENST00000372633 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
RAB40A-202ENST00000372633 HAUS7Q99871 368 aa16.02■□□□□ 0.15
RAB40A-202ENST00000372633 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 GCKRQ14397 625 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 E4F1Q66K89 784 aaPredicted RBP16.01■□□□□ 0.15
RAB40A-202ENST00000372633 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 PSDA5PKW4 1024 aaPredicted RBP16.01■□□□□ 0.15
RAB40A-202ENST00000372633 TUBB4AP04350 444 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 H2AFXP16104 143 aaPredicted RBP16.01■□□□□ 0.15
RAB40A-202ENST00000372633 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 SEC62Q99442 399 aaKnown RBP16.01■□□□□ 0.15
RAB40A-202ENST00000372633 ZNF446Q9NWS9 450 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
RAB40A-202ENST00000372633 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.01■□□□□ 0.15
RAB40A-202ENST00000372633 V9GYY5 206 aaPredicted RBP16.01■□□□□ 0.15
RAB40A-202ENST00000372633 A0A087WWV3 80 aa16■□□□□ 0.15
RAB40A-202ENST00000372633 A0A1W2PQ27 194 aa16■□□□□ 0.15
RAB40A-202ENST00000372633 A0A1W2PQ64 194 aa16■□□□□ 0.15
RAB40A-202ENST00000372633 A0A1W2PQD8 194 aa16■□□□□ 0.15
RAB40A-202ENST00000372633 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms