RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 Q6ZUG5 572 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 ERVK-7P63135 1459 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
NUP188-201ENST00000372577 CREB3L3Q68CJ9 461 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 ZCCHC11Q5TAX3 1644 aaKnown RBP12.09□□□□□ -0.47
NUP188-201ENST00000372577 EFCAB6Q5THR3 1501 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 RRP9O43818 475 aaKnown RBP12.09□□□□□ -0.47
NUP188-201ENST00000372577 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
NUP188-201ENST00000372577 C6orf229H3BNL8 230 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 ADCY5O95622 1261 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 RUFY3Q7L099 469 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 VPS36Q86VN1 386 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 GDPD2Q9HCC8 539 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 CYP7A1P22680 504 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 RTN1Q16799 776 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 PA2G4Q9UQ80 394 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 YEATS4O95619 227 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 MRPS27Q92552 414 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 SLC9C2Q5TAH2 1124 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 JAKMIP3Q5VZ66 844 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 MPNDQ8N594 471 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 ALG1Q9BT22 464 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 GTPBP4Q9BZE4 634 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 DHX32Q7L7V1 743 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 CCDC191Q8NCU4 936 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
NUP188-201ENST00000372577 TET3O43151 1660 aa12.08□□□□□ -0.48
NUP188-201ENST00000372577 AXDND1Q5T1B0 1012 aaPredicted RBP12.07□□□□□ -0.48
NUP188-201ENST00000372577 USP48Q86UV5 1035 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 FAM177A1Q8N128 213 aaPredicted RBP12.07□□□□□ -0.48
NUP188-201ENST00000372577 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 ANKRD2Q9GZV1 360 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 SYKP43405 635 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 NAA16Q6N069 864 aaPredicted RBP12.07□□□□□ -0.48
NUP188-201ENST00000372577 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 JARID2Q92833 1246 aaPredicted RBP12.07□□□□□ -0.48
NUP188-201ENST00000372577 ABCC4O15439 1325 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
NUP188-201ENST00000372577 DESP17661 470 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 UBA7P41226 1012 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 AK2P54819 239 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 IFIT1BQ5T764 474 aaKnown RBP12.07□□□□□ -0.48
NUP188-201ENST00000372577 KLHL10Q6JEL2 608 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 NIP7Q9Y221 180 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP188-201ENST00000372577 PLEKHG1Q9ULL1 1385 aa12.07□□□□□ -0.48
NUP188-201ENST00000372577 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 PRC1O43663 620 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 TFCP2Q12800 502 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 USO1O60763 962 aaKnown RBP12.06□□□□□ -0.48
NUP188-201ENST00000372577 SLC52A2Q9HAB3 445 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 IQGAP3Q86VI3 1631 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 PLCG2P16885 1265 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 CASQ1P31415 396 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 ZNF804AQ7Z570 1209 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 TUBB4AP04350 444 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 STXBP4Q6ZWJ1 553 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 G2E3Q7L622 706 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 MAP9Q49MG5 647 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 HS1BP3Q53T59 392 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 CACNA2D4Q7Z3S7 1137 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 CTAGE1Q96RT6 745 aa12.06□□□□□ -0.48
NUP188-201ENST00000372577 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 SPAG1Q07617 926 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 CNPY2Q9Y2B0 182 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 EYA2O00167 538 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
NUP188-201ENST00000372577 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 DNAI2Q9GZS0 605 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
NUP188-201ENST00000372577 TMCO3Q6UWJ1 677 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 MAGEB6P1A0A0J9YX57 407 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 CALML3P27482 149 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 PRIMPOLQ96LW4 560 aa12.05□□□□□ -0.48
NUP188-201ENST00000372577 CETN2P41208 172 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 TRMT2AQ8IZ69 625 aaKnown RBP12.04□□□□□ -0.48
NUP188-201ENST00000372577 YEATS2Q9ULM3 1422 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 TNNT1P13805 278 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 PODXL2Q9NZ53 605 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 CGNQ9P2M7 1197 aaKnown RBP12.04□□□□□ -0.48
NUP188-201ENST00000372577 CHD1O14646 1710 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 TSPY3P0CV98 308 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 TSPY8P0CW00 308 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
NUP188-201ENST00000372577 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
NUP188-201ENST00000372577 USP19O94966 1318 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 SSH2Q76I76 1423 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms