RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZBTB38Q8NAP3 1195 aaPredicted RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 CEP350Q5VT06 3117 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 YBX3P16989 372 aaKnown RBP eCLIP8.57□□□□□ -1.046e-8■□□□□ 9.3
USP1-202ENST00000371146 TFCP2Q12800 502 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 ATP2B3Q16720 1220 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 CCDC158Q5M9N0 1113 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
USP1-202ENST00000371146 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 PNMA6EA0A0J9YXQ4 647 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 SASH1O94885 1247 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 H7C1D1 291 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 CHRNDQ07001 517 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 PDIA6Q15084 440 aa8.57□□□□□ -1.04
USP1-202ENST00000371146 SECISBP2LQ93073 1101 aaKnown RBP8.57□□□□□ -1.04
USP1-202ENST00000371146 EDC3Q96F86 508 aaKnown RBP8.57□□□□□ -1.04
USP1-202ENST00000371146 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
USP1-202ENST00000371146 RNF216Q9NWF9 866 aaPredicted RBP8.57□□□□□ -1.04
USP1-202ENST00000371146 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
USP1-202ENST00000371146 USP44Q9H0E7 712 aa8.56□□□□□ -1.04
USP1-202ENST00000371146 FZD1Q9UP38 647 aa8.56□□□□□ -1.04
USP1-202ENST00000371146 NOP58Q9Y2X3 529 aaKnown RBP8.56□□□□□ -1.04
USP1-202ENST00000371146 CARMIL3Q8ND23 1372 aa8.56□□□□□ -1.04
USP1-202ENST00000371146 GOLIM4O00461 696 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 TTLL11Q8NHH1 800 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 RWDD1Q9H446 243 aaPredicted RBP8.55□□□□□ -1.04
USP1-202ENST00000371146 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 MPHOSPH10O00566 681 aaKnown RBP8.55□□□□□ -1.04
USP1-202ENST00000371146 SLC5A1P13866 664 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 NCLP19338 710 aaKnown RBP8.55□□□□□ -1.04
USP1-202ENST00000371146 MFSD14BQ5SR56 506 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 FSD1Q9BTV5 496 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 CWC22Q9HCG8 908 aaKnown RBP8.55□□□□□ -1.04
USP1-202ENST00000371146 TMOD2Q9NZR1 351 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
USP1-202ENST00000371146 RGPD5Q99666 1765 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 MINDY4BA8MYZ0 360 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 ZYXQ15942 572 aaKnown RBP8.55□□□□□ -1.04
USP1-202ENST00000371146 EYA3Q99504 573 aa8.55□□□□□ -1.04
USP1-202ENST00000371146 GLI3P10071 1580 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 KLRK1P26718 216 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 GPSM2P81274 684 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 IKQ13123 557 aaPredicted RBP8.54□□□□□ -1.04
USP1-202ENST00000371146 BEND3Q5T5X7 828 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 PIBF1Q8WXW3 757 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 TTF2Q9UNY4 1162 aaKnown RBP8.54□□□□□ -1.04
USP1-202ENST00000371146 NFAT5O94916 1531 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 DHX16O60231 1041 aaKnown RBP8.54□□□□□ -1.04
USP1-202ENST00000371146 SRGNP10124 158 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 HIBADHP31937 336 aaKnown RBP8.54□□□□□ -1.04
USP1-202ENST00000371146 MVPQ14764 893 aaKnown RBP8.54□□□□□ -1.04
USP1-202ENST00000371146 CCAR1Q8IX12 1150 aaKnown RBP8.54□□□□□ -1.04
USP1-202ENST00000371146 KIAA1210Q9ULL0 1709 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 ADORA1P30542 326 aa8.54□□□□□ -1.04
USP1-202ENST00000371146 ERVV-1B6SEH8 477 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 PCCAP05165 728 aaPredicted RBP8.53□□□□□ -1.04
USP1-202ENST00000371146 ZNF853P0CG23 659 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 FMR1Q06787 632 aaKnown RBP eCLIP8.53□□□□□ -1.044e-8■■■□□ 18.7
USP1-202ENST00000371146 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 MIGA2Q7L4E1 593 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 TXNRD3Q86VQ6 643 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 ARID3AQ99856 593 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 DBNDD2Q9BQY9 259 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
USP1-202ENST00000371146 ABCC4O15439 1325 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 USP5P45974 858 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 GRAPQ13588 217 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 CIAPIN1Q6FI81 312 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
USP1-202ENST00000371146 GRAPLQ8TC17 118 aaPredicted RBP8.53□□□□□ -1.04
USP1-202ENST00000371146 GPATCH3Q96I76 525 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 MYO9BQ13459 2157 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 A0A1B0GUL7 405 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 CHMP4BP1P59074 171 aa8.53□□□□□ -1.04
USP1-202ENST00000371146 ZNF804BA4D1E1 1349 aa8.52□□□□□ -1.04
USP1-202ENST00000371146 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 NTSR2O95665 410 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 EPS15P42566 896 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 PTGER2P43116 358 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 KIAA0100Q14667 2235 aaKnown RBP8.52□□□□□ -1.05
USP1-202ENST00000371146 SHTN1A0MZ66 631 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 MYO1BO43795 1136 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 BBOX1O75936 387 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 DLGAP5Q15398 846 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 ALDH1L2Q3SY69 923 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 ZNF804AQ7Z570 1209 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 TSKSQ9UJT2 592 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 NRKQ7Z2Y5 1582 aa8.52□□□□□ -1.05
USP1-202ENST00000371146 FAM196BA6NMK8 535 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 SLFNL1Q499Z3 407 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 TICAM2Q86XR7 235 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 MINPP1Q9UNW1 487 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 CD2APQ9Y5K6 639 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 IL16Q14005 1332 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms