RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RAB3GAP1Q15042 981 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 FILIP1LQ4L180 1135 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 PRAMEF22A3QJZ6 481 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 CHL1O00533 1208 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 RBSNQ9H1K0 784 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 HMGN5P82970 282 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 ANO6Q4KMQ2 910 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 LINS1Q8NG48 757 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 AKAP2Q9Y2D5 859 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 TXLNAP40222 546 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 MAP3K12Q12852 859 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 STX8Q9UNK0 236 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 TNNT1P13805 278 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 AFMP43652 599 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 ZSCAN25Q6NSZ9 544 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 LUZP1Q86V48 1076 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 FMN2Q9NZ56 1722 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 CDC42BPGQ6DT37 1551 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC3A2P08195 630 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 CREB3L3Q68CJ9 461 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 TSC1Q92574 1164 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 LMOD1P29536 600 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 UBE2HP62256 183 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 PTPN14Q15678 1187 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ATP2B3Q16720 1220 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 UIMC1Q96RL1 719 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 CENPHQ9H3R5 247 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 PRM3Q9NNZ6 103 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 MAGEC2Q9UBF1 373 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 METP08581 1390 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 SOGA3Q5TF21 947 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 LRSAM1Q6UWE0 723 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 FLT4P35916 1363 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 ZPR1O75312 459 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 F13A1P00488 732 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 DEF6Q9H4E7 631 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 GPS2Q13227 327 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 AXDND1Q5T1B0 1012 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 SUCLG2Q96I99 432 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 PRDM1O75626 825 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 CDKL5O76039 1030 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 IBSPP21815 317 aaPredicted RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 CCDC70Q6NSX1 233 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 SNX21Q969T3 373 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 IDEP14735 1019 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 PLIN2Q99541 437 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 USP44Q9H0E7 712 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 POLR3GO15318 223 aaPredicted RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 PROSER3Q2NL68 480 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 FAM170AA1A519 330 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 JAK2O60674 1132 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 STX17P56962 302 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 GAS2L3Q86XJ1 694 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 A0A1B0GVL5 298 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TAF5LO75529 589 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 NLRP5P59047 1200 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 AEBP2Q6ZN18 517 aaPredicted RBP10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 UBA5Q9GZZ9 404 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 SEPT11Q9NVA2 429 aaKnown RBP10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TSPY2A6NKD2 308 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 A0A087WWV3 80 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms