RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 G3V3G9 751 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 ECE2O60344 883 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 IGKV5-2P06315 115 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 MAP2K1Q02750 393 aaPredicted RBP20.65■□□□□ 0.9
VMA21-202ENST00000370361 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 CDC37L1Q7L3B6 337 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 DBNDD1Q9H9R9 158 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
VMA21-202ENST00000370361 NEURL1BA8MQ27 555 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 PSMD14O00487 310 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 UFL1O94874 794 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 FLIIQ13045 1269 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 MICALL2Q8IY33 904 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 TNS4Q8IZW8 715 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 HHIPL1Q96JK4 782 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 PRDM10Q9NQV6 1147 aa20.64■□□□□ 0.89
VMA21-202ENST00000370361 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
VMA21-202ENST00000370361 ATP2B4P23634 1241 aa20.63■□□□□ 0.89
VMA21-202ENST00000370361 CTCFP49711 727 aaPredicted RBP20.63■□□□□ 0.89
VMA21-202ENST00000370361 TLL2Q9Y6L7 1015 aa20.63■□□□□ 0.89
VMA21-202ENST00000370361 THSD7BQ9C0I4 1608 aa20.63■□□□□ 0.89
VMA21-202ENST00000370361 COL4A1P02462 1669 aa20.62■□□□□ 0.89
VMA21-202ENST00000370361 RIMBP2O15034 1052 aa20.62■□□□□ 0.89
VMA21-202ENST00000370361 PLA2G12BQ9BX93 195 aa20.62■□□□□ 0.89
VMA21-202ENST00000370361 BSDC1Q9NW68 430 aaPredicted RBP20.62■□□□□ 0.89
VMA21-202ENST00000370361 WBP1LQ9NX94 342 aa20.62■□□□□ 0.89
VMA21-202ENST00000370361 H7C1W4 665 aa20.61■□□□□ 0.89
VMA21-202ENST00000370361 VIL1P09327 827 aaKnown RBP20.61■□□□□ 0.89
VMA21-202ENST00000370361 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
VMA21-202ENST00000370361 CST9Q5W186 159 aa20.61■□□□□ 0.89
VMA21-202ENST00000370361 LINS1Q8NG48 757 aa20.61■□□□□ 0.89
VMA21-202ENST00000370361 TTLL11Q8NHH1 800 aa20.61■□□□□ 0.89
VMA21-202ENST00000370361 DNAAF4Q8WXU2 420 aa20.61■□□□□ 0.89
VMA21-202ENST00000370361 PODNQ7Z5L7 613 aa20.6■□□□□ 0.89
VMA21-202ENST00000370361 AGBL3Q8NEM8 1001 aa20.6■□□□□ 0.89
VMA21-202ENST00000370361 TRPM4Q8TD43 1214 aa20.6■□□□□ 0.89
VMA21-202ENST00000370361 TRAF5O00463 557 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 VAMP4O75379 141 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 CELF2O95319 508 aaKnown RBP20.59■□□□□ 0.89
VMA21-202ENST00000370361 HIRAP54198 1017 aaPredicted RBP20.59■□□□□ 0.89
VMA21-202ENST00000370361 GCKRQ14397 625 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 DOK7Q18PE1 504 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 CWF19L2Q2TBE0 894 aaKnown RBP20.59■□□□□ 0.89
VMA21-202ENST00000370361 CAPNS2Q96L46 248 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
VMA21-202ENST00000370361 PSME4Q14997 1843 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
VMA21-202ENST00000370361 FOXN1O15353 648 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 MAP2K2P36507 400 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
VMA21-202ENST00000370361 MMP14P50281 582 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 G2E3Q7L622 706 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 UBE3BQ7Z3V4 1068 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 SAPCD2Q86UD0 394 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 BEGAINQ9BUH8 593 aa20.58■□□□□ 0.89
VMA21-202ENST00000370361 GLIS2Q9BZE0 524 aaPredicted RBP20.58■□□□□ 0.89
VMA21-202ENST00000370361 DCPSQ96C86 337 aaKnown RBP20.57■□□□□ 0.88
VMA21-202ENST00000370361 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
VMA21-202ENST00000370361 GREM2Q9H772 168 aa20.57■□□□□ 0.88
VMA21-202ENST00000370361 RSBN1LQ6PCB5 846 aaPredicted RBP20.56■□□□□ 0.88
VMA21-202ENST00000370361 PAXIP1Q6ZW49 1069 aaPredicted RBP20.56■□□□□ 0.88
VMA21-202ENST00000370361 JARID2Q92833 1246 aaPredicted RBP20.56■□□□□ 0.88
VMA21-202ENST00000370361 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
VMA21-202ENST00000370361 ANKRD2Q9GZV1 360 aa20.56■□□□□ 0.88
VMA21-202ENST00000370361 MINPP1Q9UNW1 487 aa20.56■□□□□ 0.88
VMA21-202ENST00000370361 LEMD3Q9Y2U8 911 aa20.56■□□□□ 0.88
VMA21-202ENST00000370361 CA12O43570 354 aa20.55■□□□□ 0.88
VMA21-202ENST00000370361 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
VMA21-202ENST00000370361 EXOSC9Q06265 439 aaKnown RBP20.55■□□□□ 0.88
VMA21-202ENST00000370361 KIF4BQ2VIQ3 1234 aa20.55■□□□□ 0.88
VMA21-202ENST00000370361 SAMD7Q7Z3H4 446 aa20.55■□□□□ 0.88
VMA21-202ENST00000370361 KRT26Q7Z3Y9 468 aa20.55■□□□□ 0.88
VMA21-202ENST00000370361 SCN9AQ15858 1988 aa20.55■□□□□ 0.88
VMA21-202ENST00000370361 MYO3BQ8WXR4 1341 aa20.54■□□□□ 0.88
VMA21-202ENST00000370361 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
VMA21-202ENST00000370361 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
VMA21-202ENST00000370361 CSF1RP07333 972 aa20.54■□□□□ 0.88
VMA21-202ENST00000370361 TBC1D10BQ4KMP7 808 aaPredicted RBP20.54■□□□□ 0.88
VMA21-202ENST00000370361 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
VMA21-202ENST00000370361 MPHOSPH8Q99549 860 aa20.54■□□□□ 0.88
VMA21-202ENST00000370361 ITGA6P23229 1130 aa20.53■□□□□ 0.88
VMA21-202ENST00000370361 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
VMA21-202ENST00000370361 CASP7P55210 303 aa20.53■□□□□ 0.88
VMA21-202ENST00000370361 FMR1Q06787 632 aaKnown RBP eCLIP20.53■□□□□ 0.88
VMA21-202ENST00000370361 SULF1Q8IWU6 871 aa20.53■□□□□ 0.88
VMA21-202ENST00000370361 COA1Q9GZY4 146 aa20.53■□□□□ 0.88
VMA21-202ENST00000370361 KCNQ5Q9NR82 932 aa20.53■□□□□ 0.88
VMA21-202ENST00000370361 SHTN1A0MZ66 631 aa20.52■□□□□ 0.88
VMA21-202ENST00000370361 CYP4F22Q6NT55 531 aa20.52■□□□□ 0.88
VMA21-202ENST00000370361 USP48Q86UV5 1035 aa20.52■□□□□ 0.88
VMA21-202ENST00000370361 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
VMA21-202ENST00000370361 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
VMA21-202ENST00000370361 SPEF2Q9C093 1822 aa20.51■□□□□ 0.87
VMA21-202ENST00000370361 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
VMA21-202ENST00000370361 FAM9BQ8IZU0 186 aa20.51■□□□□ 0.87
VMA21-202ENST00000370361 ZNF408Q9H9D4 720 aa20.51■□□□□ 0.87
VMA21-202ENST00000370361 ANKRD18BA2A2Z9 1011 aa20.5■□□□□ 0.87
VMA21-202ENST00000370361 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
VMA21-202ENST00000370361 NOGQ13253 232 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms