RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 USP37Q86T82 979 aa14.15□□□□□ -0.14
HCFC1-202ENST00000369984 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
HCFC1-202ENST00000369984 MKRN1Q9UHC7 482 aaKnown RBP14.15□□□□□ -0.14
HCFC1-202ENST00000369984 ZEB2O60315 1214 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 TRIM27P14373 513 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 CCDC50Q8IVM0 306 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 ERMNQ8TAM6 284 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 CAPZA3Q96KX2 299 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 SLC52A1Q9NWF4 448 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
HCFC1-202ENST00000369984 NUDT16Q96DE0 195 aaKnown RBP14.14□□□□□ -0.15
HCFC1-202ENST00000369984 PPP1R9BQ96SB3 815 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 IFIT1BQ5T764 474 aaKnown RBP14.14□□□□□ -0.15
HCFC1-202ENST00000369984 TACC1O75410 805 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 TPD52P55327 224 aaPredicted RBP14.14□□□□□ -0.15
HCFC1-202ENST00000369984 TSHZ3Q63HK5 1081 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 EBAG9O00559 213 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 MRVI1Q9Y6F6 885 aa14.14□□□□□ -0.15
HCFC1-202ENST00000369984 CPLX4Q7Z7G2 160 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 MPHOSPH6Q99547 160 aaKnown RBP14.13□□□□□ -0.15
HCFC1-202ENST00000369984 PHACTR2O75167 634 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 USP48Q86UV5 1035 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 GBP7Q8N8V2 638 aaPredicted RBP14.13□□□□□ -0.15
HCFC1-202ENST00000369984 NDC80O14777 642 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 RFC1P35251 1148 aaPredicted RBP14.13□□□□□ -0.15
HCFC1-202ENST00000369984 KIF5AQ12840 1032 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 AOPEPQ8N6M6 819 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 USHBP1Q8N6Y0 703 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 SMIM23A6NLE4 172 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 TUBB4BP68371 445 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
HCFC1-202ENST00000369984 WTAPQ15007 396 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 SMC1BQ8NDV3 1235 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 KRT86O43790 486 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 HLA-DOAP06340 250 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 ZBTB9Q96C00 473 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.155e-7■■■■■ 30.7
HCFC1-202ENST00000369984 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
HCFC1-202ENST00000369984 EEF2P13639 858 aaKnown RBP14.12□□□□□ -0.15
HCFC1-202ENST00000369984 LMBR1Q8WVP7 490 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 TBC1D32Q96NH3 1257 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 SEPT10Q9P0V9 454 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
HCFC1-202ENST00000369984 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 DNAJC21Q5F1R6 531 aaKnown RBP14.12□□□□□ -0.15
HCFC1-202ENST00000369984 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 KRT83P78385 493 aa14.12□□□□□ -0.15
HCFC1-202ENST00000369984 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 ERCC3P19447 782 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 TSGA10Q9BZW7 698 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 TXNDC16Q9P2K2 825 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 CA8P35219 290 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 GJC1P36383 396 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 IFT81Q8WYA0 676 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 CCDC114Q96M63 670 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 ALG1Q9BT22 464 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 STIM2Q9P246 746 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 KRT23Q9C075 422 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
HCFC1-202ENST00000369984 PSMA7O14818 248 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 UBXN1Q04323 297 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 CCDC25Q86WR0 208 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 WHAMMQ8TF30 809 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 RSRC1Q96IZ7 334 aaKnown RBP14.1□□□□□ -0.15
HCFC1-202ENST00000369984 TMX3Q96JJ7 454 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 TRIM7Q9C029 511 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 BMP15O95972 392 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 GPTP24298 496 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 MARCKSP29966 332 aaPredicted RBP14.1□□□□□ -0.15
HCFC1-202ENST00000369984 CFAP157Q5JU67 520 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 SAMD15Q9P1V8 674 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 ZBTB43O43298 467 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 SEC62Q99442 399 aaKnown RBP14.1□□□□□ -0.15
HCFC1-202ENST00000369984 SEPT14Q6ZU15 432 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 FAM200AQ8TCP9 573 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 KCNK9Q9NPC2 374 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 ATP2A2P16615 1042 aaKnown RBP14.1□□□□□ -0.15
HCFC1-202ENST00000369984 NBPF11Q86T75 865 aa14.1□□□□□ -0.15
HCFC1-202ENST00000369984 CDC5LQ99459 802 aaKnown RBP14.1□□□□□ -0.15
HCFC1-202ENST00000369984 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
HCFC1-202ENST00000369984 RTN1Q16799 776 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 PPP1R7Q15435 360 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 CCDC14Q49A88 953 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 JAKMIP2Q96AA8 810 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 CABP5Q9NP86 173 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 FAM114A2Q9NRY5 505 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 CCDC186Q7Z3E2 898 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 C6orf229H3BNL8 230 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 ATP11AP98196 1134 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms