RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 RAB11FIP3O75154 756 aa21.12■□□□□ 0.97
UBE3D-203ENST00000369747 MX1P20591 662 aa21.12■□□□□ 0.97
UBE3D-203ENST00000369747 CRY2Q49AN0 593 aa21.12■□□□□ 0.97
UBE3D-203ENST00000369747 LDHAL6AQ6ZMR3 332 aa21.12■□□□□ 0.97
UBE3D-203ENST00000369747 KLRG2A4D1S0 409 aaPredicted RBP21.12■□□□□ 0.97
UBE3D-203ENST00000369747 CELF1Q92879 486 aaKnown RBP21.12■□□□□ 0.97
UBE3D-203ENST00000369747 KIF1BPQ96EK5 621 aa21.12■□□□□ 0.97
UBE3D-203ENST00000369747 SLKQ9H2G2 1235 aaPredicted RBP21.12■□□□□ 0.97
UBE3D-203ENST00000369747 STAP2Q9UGK3 403 aa21.12■□□□□ 0.97
UBE3D-203ENST00000369747 TSHZ3Q63HK5 1081 aa21.11■□□□□ 0.97
UBE3D-203ENST00000369747 SNX21Q969T3 373 aa21.1■□□□□ 0.97
UBE3D-203ENST00000369747 SPEF2Q9C093 1822 aa21.1■□□□□ 0.97
UBE3D-203ENST00000369747 DDX46Q7L014 1031 aaKnown RBP21.1■□□□□ 0.97
UBE3D-203ENST00000369747 RIPOR2Q9Y4F9 1068 aa21.1■□□□□ 0.97
UBE3D-203ENST00000369747 CIAO1O76071 339 aa21.09■□□□□ 0.97
UBE3D-203ENST00000369747 TFCP2Q12800 502 aa21.09■□□□□ 0.97
UBE3D-203ENST00000369747 CASC1Q6TDU7 716 aa21.09■□□□□ 0.97
UBE3D-203ENST00000369747 ERC1Q8IUD2 1116 aa21.09■□□□□ 0.97
UBE3D-203ENST00000369747 RPGRQ92834 1020 aaKnown RBP21.09■□□□□ 0.97
UBE3D-203ENST00000369747 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
UBE3D-203ENST00000369747 MPHOSPH8Q99549 860 aa21.09■□□□□ 0.97
UBE3D-203ENST00000369747 CNNM1Q9NRU3 951 aa21.09■□□□□ 0.97
UBE3D-203ENST00000369747 AK9Q5TCS8 1911 aa21.08■□□□□ 0.97
UBE3D-203ENST00000369747 LRP5O75197 1615 aa21.08■□□□□ 0.97
UBE3D-203ENST00000369747 IL15P40933 162 aaPredicted RBP21.08■□□□□ 0.97
UBE3D-203ENST00000369747 HSCBQ8IWL3 235 aa21.08■□□□□ 0.97
UBE3D-203ENST00000369747 IGHMBP2P38935 993 aaKnown RBP21.08■□□□□ 0.96
UBE3D-203ENST00000369747 ANKRD18AQ8IVF6 992 aa21.08■□□□□ 0.96
UBE3D-203ENST00000369747 USP26Q9BXU7 913 aa21.08■□□□□ 0.96
UBE3D-203ENST00000369747 FBXO3Q9UK99 471 aa21.08■□□□□ 0.96
UBE3D-203ENST00000369747 UTRNP46939 3433 aa21.07■□□□□ 0.96
UBE3D-203ENST00000369747 AOX1Q06278 1338 aa21.07■□□□□ 0.96
UBE3D-203ENST00000369747 SRGNP10124 158 aa21.07■□□□□ 0.96
UBE3D-203ENST00000369747 PDE6BP35913 854 aa21.07■□□□□ 0.96
UBE3D-203ENST00000369747 RPS8P62241 208 aaKnown RBP21.07■□□□□ 0.96
UBE3D-203ENST00000369747 SGIP1Q9BQI5 828 aa21.07■□□□□ 0.96
UBE3D-203ENST00000369747 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
UBE3D-203ENST00000369747 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
UBE3D-203ENST00000369747 POLD1P28340 1107 aa21.06■□□□□ 0.96
UBE3D-203ENST00000369747 HOXA10P31260 410 aaPredicted RBP21.06■□□□□ 0.96
UBE3D-203ENST00000369747 C10orf71Q711Q0 1435 aa21.05■□□□□ 0.96
UBE3D-203ENST00000369747 PTGER2P43116 358 aa21.05■□□□□ 0.96
UBE3D-203ENST00000369747 GRAPQ13588 217 aa21.05■□□□□ 0.96
UBE3D-203ENST00000369747 HELBQ8NG08 1087 aaPredicted RBP21.05■□□□□ 0.96
UBE3D-203ENST00000369747 GRAPLQ8TC17 118 aaPredicted RBP21.05■□□□□ 0.96
UBE3D-203ENST00000369747 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
UBE3D-203ENST00000369747 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
UBE3D-203ENST00000369747 BSDC1Q9NW68 430 aaPredicted RBP21.05■□□□□ 0.96
UBE3D-203ENST00000369747 CHRNA5P30532 468 aa21.04■□□□□ 0.96
UBE3D-203ENST00000369747 METTL24Q5JXM2 366 aa21.04■□□□□ 0.96
UBE3D-203ENST00000369747 CLASRPQ8N2M8 674 aaKnown RBP21.04■□□□□ 0.96
UBE3D-203ENST00000369747 SPRYD3Q8NCJ5 442 aa21.04■□□□□ 0.96
UBE3D-203ENST00000369747 C2CD5Q86YS7 1000 aa21.04■□□□□ 0.96
UBE3D-203ENST00000369747 VGLL2Q8N8G2 317 aa21.04■□□□□ 0.96
UBE3D-203ENST00000369747 CEP126Q9P2H0 1117 aa21.04■□□□□ 0.96
UBE3D-203ENST00000369747 FRAT2O75474 233 aaPredicted RBP21.03■□□□□ 0.96
UBE3D-203ENST00000369747 AACSQ86V21 672 aa21.03■□□□□ 0.96
UBE3D-203ENST00000369747 ERC2O15083 957 aa21.02■□□□□ 0.96
UBE3D-203ENST00000369747 TAF5LO75529 589 aa21.02■□□□□ 0.96
UBE3D-203ENST00000369747 NPR1P16066 1061 aa21.02■□□□□ 0.96
UBE3D-203ENST00000369747 CHRNDQ07001 517 aa21.02■□□□□ 0.96
UBE3D-203ENST00000369747 TNNI3KQ59H18 835 aa21.02■□□□□ 0.96
UBE3D-203ENST00000369747 TLR7Q9NYK1 1049 aaKnown RBP21.02■□□□□ 0.96
UBE3D-203ENST00000369747 FPGT-TNNI3KV9GXZ4 949 aa21.02■□□□□ 0.96
UBE3D-203ENST00000369747 H0YIN7 160 aa21.02■□□□□ 0.95
UBE3D-203ENST00000369747 REC8O95072 547 aa21.02■□□□□ 0.95
UBE3D-203ENST00000369747 CD2BP2O95400 341 aaKnown RBP21.02■□□□□ 0.95
UBE3D-203ENST00000369747 TIMM10P62072 90 aa21.02■□□□□ 0.95
UBE3D-203ENST00000369747 CRAMP1Q96RY5 1269 aa21.02■□□□□ 0.95
UBE3D-203ENST00000369747 CCDC8Q9H0W5 538 aaPredicted RBP21.02■□□□□ 0.95
UBE3D-203ENST00000369747 MINPP1Q9UNW1 487 aa21.02■□□□□ 0.95
UBE3D-203ENST00000369747 MROH5Q6ZUA9 1318 aa21.01■□□□□ 0.95
UBE3D-203ENST00000369747 SNAP23O00161 211 aa21.01■□□□□ 0.95
UBE3D-203ENST00000369747 PDE8BO95263 885 aa21.01■□□□□ 0.95
UBE3D-203ENST00000369747 MASTLQ96GX5 879 aa21.01■□□□□ 0.95
UBE3D-203ENST00000369747 WTIPA6NIX2 430 aaPredicted RBP21■□□□□ 0.95
UBE3D-203ENST00000369747 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
UBE3D-203ENST00000369747 PI4K2BQ8TCG2 481 aa21■□□□□ 0.95
UBE3D-203ENST00000369747 ZNF622Q969S3 477 aaKnown RBP eCLIP21■□□□□ 0.95
UBE3D-203ENST00000369747 RILPL2Q969X0 211 aa21■□□□□ 0.95
UBE3D-203ENST00000369747 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
UBE3D-203ENST00000369747 A0A1B0GUL7 405 aa20.99■□□□□ 0.95
UBE3D-203ENST00000369747 IFIT2P09913 472 aaKnown RBP20.99■□□□□ 0.95
UBE3D-203ENST00000369747 CHMLP26374 656 aa20.99■□□□□ 0.95
UBE3D-203ENST00000369747 ESYT1Q9BSJ8 1104 aa20.99■□□□□ 0.95
UBE3D-203ENST00000369747 DBNLQ9UJU6 430 aaKnown RBP20.99■□□□□ 0.95
UBE3D-203ENST00000369747 KIF13BQ9NQT8 1826 aa20.99■□□□□ 0.95
UBE3D-203ENST00000369747 BBOX1O75936 387 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 DEKP35659 375 aaKnown RBP20.98■□□□□ 0.95
UBE3D-203ENST00000369747 RABEP1Q15276 862 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 NEUROD6Q96NK8 337 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 GPR108Q9NPR9 543 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 ZNF609O15014 1411 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 A0A1B0GUL6 1792 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 A0A0G2JLW4 131 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 ALDH1B1P30837 517 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 DBNDD2Q9BQY9 259 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 SPON1Q9HCB6 807 aa20.98■□□□□ 0.95
UBE3D-203ENST00000369747 CACNA1SQ13698 1873 aa20.97■□□□□ 0.95
UBE3D-203ENST00000369747 DPEP1P16444 411 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms