RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 LONRF2Q1L5Z9 754 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 PSD3Q9NYI0 1048 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 ENO4A6NNW6 628 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 GNAI1P63096 354 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 PPFIA1Q13136 1202 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
PRDM1-201ENST00000369089 MAATS1Q7Z4T9 603 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 CCDC47Q96A33 483 aaKnown RBP11.88□□□□□ -0.51
PRDM1-201ENST00000369089 FAM169AQ9Y6X4 670 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 SDCCAG8Q86SQ7 713 aaPredicted RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 DAAM2Q86T65 1068 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 RABGGTAQ92696 567 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 GBP5Q96PP8 586 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 CAPS2Q9BXY5 557 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 NLRP6P59044 892 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 ETF1P62495 437 aaKnown RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 NSRP1Q9H0G5 558 aaKnown RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 ACBD5Q5T8D3 534 aaPredicted RBP11.87□□□□□ -0.51
PRDM1-201ENST00000369089 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
PRDM1-201ENST00000369089 CTNNBL1Q8WYA6 563 aaPredicted RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 INTS4Q96HW7 963 aaKnown RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 SH3BP1Q9Y3L3 701 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 PLEKHA4Q9H4M7 779 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 ZCCHC17Q9NP64 241 aaKnown RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 ORC3Q9UBD5 711 aaPredicted RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 NOB1Q9ULX3 412 aaKnown RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 CETN3O15182 167 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 FOSBP53539 338 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 IFT74Q96LB3 600 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 CCDC151A5D8V7 595 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 HNRNPH1P31943 449 aaKnown RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 IMMTQ16891 758 aaKnown RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 STAG1Q8WVM7 1258 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 SGSM3Q96HU1 749 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 IMPACTQ9P2X3 320 aa11.86□□□□□ -0.51
PRDM1-201ENST00000369089 PAIP2BQ9ULR5 123 aaKnown RBP11.86□□□□□ -0.51
PRDM1-201ENST00000369089 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 CCDC160A6NGH7 325 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 GBP1P32455 592 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 PAFAH1B1P43034 410 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 ST5P78524 1137 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 ANKRD1Q15327 319 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 NUTM2GQ5VZR2 741 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 PACS2Q86VP3 889 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 GOLGA6BA6NDN3 693 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 CBX8Q9HC52 389 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 HSP90AB4PQ58FF6 505 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 THEMISQ8N1K5 641 aaPredicted RBP11.85□□□□□ -0.51
PRDM1-201ENST00000369089 USP19O94966 1318 aa11.85□□□□□ -0.51
PRDM1-201ENST00000369089 DNAJC8O75937 253 aaPredicted RBP11.84□□□□□ -0.51
PRDM1-201ENST00000369089 HSP90AB2PQ58FF8 381 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 LRRC8AQ8IWT6 810 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 ZBTB10Q96DT7 871 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 POLE2P56282 527 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
PRDM1-201ENST00000369089 SH2B1Q9NRF2 756 aaPredicted RBP11.84□□□□□ -0.51
PRDM1-201ENST00000369089 FANCAO15360 1455 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
PRDM1-201ENST00000369089 NUCB1Q02818 461 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 CUL3Q13618 768 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
PRDM1-201ENST00000369089 LIMCH1Q9UPQ0 1083 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 F13A1P00488 732 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 NLRP5P59047 1200 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 TRIM29Q14134 588 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 GNPTABQ3T906 1256 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 SPAG5Q96R06 1193 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
PRDM1-201ENST00000369089 KIF9Q9HAQ2 790 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
PRDM1-201ENST00000369089 ADAMTS12P58397 1594 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 TCP11Q8WWU5 503 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 LAMB3Q13751 1172 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 IDI1Q13907 227 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 AOPEPQ8N6M6 819 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 TRIM58Q8NG06 486 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 DDX12PQ92771 950 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 UTP14AQ9BVJ6 771 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms