RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 MED23Q9ULK4 1368 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 BECN2A8MW95 431 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 ATL3Q6DD88 541 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 ERICH4A6NGS2 130 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 PNMA6AP0CW24 399 aaPredicted RBP12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 CAPN2P17655 700 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 CLCN6P51797 869 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 CEP57L1Q8IYX8 460 aa12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 ARGLU1Q9NWB6 273 aaPredicted RBP12.31□□□□□ -0.44
LYSMD1-201ENST00000368908 CCP110O43303 1012 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 ZRANB2O95218 330 aaKnown RBP eCLIP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 TPM4P67936 248 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 ST7Q9NRC1 585 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 ABCC6O95255 1503 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 HOXB7P09629 217 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 KRT32Q14532 448 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 BEND3Q5T5X7 828 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 NGDNQ8NEJ9 315 aaKnown RBP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 PPP1R13BQ96KQ4 1090 aa12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 SRRTQ9BXP5 876 aaKnown RBP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 TRMT1Q9NXH9 659 aaKnown RBP12.3□□□□□ -0.44
LYSMD1-201ENST00000368908 ACEP12821 1306 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 NRDCO43847 1150 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 DTNBO60941 627 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 PLA2G4AP47712 749 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 E4F1Q66K89 784 aaPredicted RBP12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 CCDC73Q6ZRK6 1079 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 TXLNBQ8N3L3 684 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 BPIFA3Q9BQP9 254 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 TPM1P09493 284 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 NBPF11Q86T75 865 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 BRF1Q92994 677 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 UBXN6Q9BZV1 441 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 HDAC5Q9UQL6 1122 aa12.29□□□□□ -0.44
LYSMD1-201ENST00000368908 NBPF7P0C2Y1 421 aaPredicted RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 HNRNPH2P55795 449 aaKnown RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 FAM160A1Q05DH4 1040 aa12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 DNAAF4Q8WXU2 420 aa12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 LLPHQ9BRT6 129 aaKnown RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 ADD1P35611 737 aaKnown RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 ENGASEQ8NFI3 743 aa12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 SMARCC2Q8TAQ2 1214 aa12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 EYA1Q99502 592 aa12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 PHAXQ9H814 394 aaKnown RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
LYSMD1-201ENST00000368908 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.44
LYSMD1-201ENST00000368908 MRC1P22897 1456 aa12.27□□□□□ -0.44
LYSMD1-201ENST00000368908 H3BQV1 296 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 USPL1Q5W0Q7 1092 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 TMCO3Q6UWJ1 677 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 RFX7Q2KHR2 1363 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 AOPEPQ8N6M6 819 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 GOLPH3LQ9H4A5 285 aa12.27□□□□□ -0.45
LYSMD1-201ENST00000368908 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 SYT10Q6XYQ8 523 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 DDX17Q92841 729 aaKnown RBP12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 FEZ2Q9UHY8 353 aaPredicted RBP12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 VGLL3A8MV65 326 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 JAK2O60674 1132 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 SFPQP23246 707 aaKnown RBP eCLIP12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 IL17REQ8NFR9 667 aa12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 ZNF396Q96N95 335 aaPredicted RBP12.26□□□□□ -0.45
LYSMD1-201ENST00000368908 A0A0D9SFI3 127 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 TADA3O75528 432 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
LYSMD1-201ENST00000368908 COL9A3Q14050 684 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms