RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
TPM3-210ENST00000368530 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 TMX4Q9H1E5 349 aaPredicted RBP12.69□□□□□ -0.38
TPM3-210ENST00000368530 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 COL4A1P02462 1669 aa12.68□□□□□ -0.38
TPM3-210ENST00000368530 CELF2O95319 508 aaKnown RBP12.68□□□□□ -0.38
TPM3-210ENST00000368530 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
TPM3-210ENST00000368530 SF3B3Q15393 1217 aaKnown RBP12.68□□□□□ -0.38
TPM3-210ENST00000368530 HHIPL1Q96JK4 782 aa12.68□□□□□ -0.38
TPM3-210ENST00000368530 TNIP1Q15025 636 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 DLK2Q6UY11 383 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
TPM3-210ENST00000368530 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 BCL2L13Q9BXK5 485 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 CNOT7Q9UIV1 285 aaKnown RBP12.67□□□□□ -0.38
TPM3-210ENST00000368530 TAF1P21675 1872 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 TRPM7Q96QT4 1865 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
TPM3-210ENST00000368530 GRM1Q13255 1194 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
TPM3-210ENST00000368530 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 FAM89AQ96GI7 184 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 KCNQ5Q9NR82 932 aa12.67□□□□□ -0.38
TPM3-210ENST00000368530 EGFRP00533 1210 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
TPM3-210ENST00000368530 TRIM28Q13263 835 aaKnown RBP12.66□□□□□ -0.38
TPM3-210ENST00000368530 CDC37L1Q7L3B6 337 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 DPF2Q92785 391 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
TPM3-210ENST00000368530 ZIC5Q96T25 663 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 POLLQ9UGP5 575 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 TSKSQ9UJT2 592 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 LRRC37AA6NMS7 1700 aa12.66□□□□□ -0.38
TPM3-210ENST00000368530 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
TPM3-210ENST00000368530 PSMD14O00487 310 aa12.65□□□□□ -0.38
TPM3-210ENST00000368530 HOXB7P09629 217 aa12.65□□□□□ -0.38
TPM3-210ENST00000368530 WASHC4Q2M389 1173 aa12.65□□□□□ -0.38
TPM3-210ENST00000368530 HDGFL1Q5TGJ6 251 aa12.65□□□□□ -0.38
TPM3-210ENST00000368530 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
TPM3-210ENST00000368530 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
TPM3-210ENST00000368530 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
TPM3-210ENST00000368530 GNAI1P63096 354 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 GPSM2P81274 684 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 DBNDD1Q9H9R9 158 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
TPM3-210ENST00000368530 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
TPM3-210ENST00000368530 H7C1D1 291 aa12.63□□□□□ -0.39
TPM3-210ENST00000368530 ZNF853P0CG23 659 aa12.63□□□□□ -0.39
TPM3-210ENST00000368530 RGS19P49795 217 aa12.63□□□□□ -0.39
TPM3-210ENST00000368530 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
TPM3-210ENST00000368530 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
TPM3-210ENST00000368530 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
TPM3-210ENST00000368530 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
TPM3-210ENST00000368530 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 ZNF408Q9H9D4 720 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
TPM3-210ENST00000368530 IRS4O14654 1257 aaPredicted RBP12.62□□□□□ -0.39
TPM3-210ENST00000368530 CA12O43570 354 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
TPM3-210ENST00000368530 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 SMC4Q9NTJ3 1288 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
TPM3-210ENST00000368530 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
TPM3-210ENST00000368530 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
TPM3-210ENST00000368530 ECE2O60344 883 aa12.61□□□□□ -0.39
TPM3-210ENST00000368530 VIL1P09327 827 aaKnown RBP12.61□□□□□ -0.39
TPM3-210ENST00000368530 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
TPM3-210ENST00000368530 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
TPM3-210ENST00000368530 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
TPM3-210ENST00000368530 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
TPM3-210ENST00000368530 SEC31BQ9NQW1 1179 aa12.61□□□□□ -0.39
TPM3-210ENST00000368530 HUNKP57058 714 aa12.6□□□□□ -0.39
TPM3-210ENST00000368530 NOGQ13253 232 aa12.6□□□□□ -0.39
TPM3-210ENST00000368530 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
TPM3-210ENST00000368530 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
TPM3-210ENST00000368530 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
TPM3-210ENST00000368530 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
TPM3-210ENST00000368530 MCOLN1Q9GZU1 580 aa12.6□□□□□ -0.39
TPM3-210ENST00000368530 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
TPM3-210ENST00000368530 ADM5C9JUS6 153 aa12.59□□□□□ -0.39
TPM3-210ENST00000368530 ASTN2O75129 1339 aaPredicted RBP12.59□□□□□ -0.39
TPM3-210ENST00000368530 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
TPM3-210ENST00000368530 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
TPM3-210ENST00000368530 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
TPM3-210ENST00000368530 EYA3Q99504 573 aa12.58□□□□□ -0.4
TPM3-210ENST00000368530 GBA2Q9HCG7 927 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms