RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.06
LMNA-206ENST00000368300 DZIP3Q86Y13 1208 aaKnown RBP14.71□□□□□ -0.06
LMNA-206ENST00000368300 XAGE2Q96GT9 111 aa14.71□□□□□ -0.06
LMNA-206ENST00000368300 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.71□□□□□ -0.06
LMNA-206ENST00000368300 WDR33Q9C0J8 1336 aaKnown RBP14.7□□□□□ -0.06
LMNA-206ENST00000368300 STX6O43752 255 aa14.7□□□□□ -0.06
LMNA-206ENST00000368300 ITGA6P23229 1130 aa14.7□□□□□ -0.06
LMNA-206ENST00000368300 PSMA5P28066 241 aa14.7□□□□□ -0.06
LMNA-206ENST00000368300 TMEM63CQ9P1W3 806 aa14.7□□□□□ -0.06
LMNA-206ENST00000368300 ROBO1Q9Y6N7 1651 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 IRS4O14654 1257 aaPredicted RBP14.69□□□□□ -0.06
LMNA-206ENST00000368300 CYP21A2P08686 494 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 RPS6KB1P23443 525 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 LDHAL6AQ6ZMR3 332 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 TTLL11Q8NHH1 800 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 PAPPAQ13219 1627 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 CIAO1O76071 339 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 TOB2Q14106 344 aaPredicted RBP14.69□□□□□ -0.06
LMNA-206ENST00000368300 MARCH10Q8NA82 808 aaPredicted RBP14.69□□□□□ -0.06
LMNA-206ENST00000368300 GPR108Q9NPR9 543 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 CNPY2Q9Y2B0 182 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 NUP188Q5SRE5 1749 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 CSF1RP07333 972 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 ZSCAN22P10073 491 aaPredicted RBP14.69□□□□□ -0.06
LMNA-206ENST00000368300 TTC39AQ5SRH9 613 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 USP48Q86UV5 1035 aa14.69□□□□□ -0.06
LMNA-206ENST00000368300 HELBQ8NG08 1087 aaPredicted RBP14.69□□□□□ -0.06
LMNA-206ENST00000368300 TJP1Q07157 1748 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 VPS37CA5D8V6 355 aaPredicted RBP14.68□□□□□ -0.06
LMNA-206ENST00000368300 ATP6V1AP38606 617 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 KCNQ4P56696 695 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 METTL24Q5JXM2 366 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 KCNQ2O43526 872 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 HCLS1P14317 486 aaPredicted RBP14.68□□□□□ -0.06
LMNA-206ENST00000368300 SPATA31A1Q5TZJ5 1347 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 UBN2Q6ZU65 1347 aa14.68□□□□□ -0.06
LMNA-206ENST00000368300 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
LMNA-206ENST00000368300 USPL1Q5W0Q7 1092 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 STOX1Q6ZVD7 989 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
LMNA-206ENST00000368300 CNNM1Q9NRU3 951 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 SYCE3A1L190 88 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 SNAP23O00161 211 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 ZAP70P43403 619 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 CCDC158Q5M9N0 1113 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 FERMT3Q86UX7 667 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 NEK1Q96PY6 1258 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 SH2B1Q9NRF2 756 aaPredicted RBP14.67□□□□□ -0.06
LMNA-206ENST00000368300 PPFIA3O75145 1194 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 CTSWP56202 376 aa14.67□□□□□ -0.06
LMNA-206ENST00000368300 M0R2C6 588 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 WASHC4Q2M389 1173 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 SMIM5Q71RC9 77 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 OSBP2Q969R2 916 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 RIPOR2Q9Y4F9 1068 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
LMNA-206ENST00000368300 FIBPO43427 364 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 ZMYM1Q5SVZ6 1142 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 FAM173BQ6P4H8 233 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
LMNA-206ENST00000368300 CHST3Q7LGC8 479 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 PLA2G12BQ9BX93 195 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 HMG20BQ9P0W2 317 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 MTMR6Q9Y217 621 aa14.66□□□□□ -0.06
LMNA-206ENST00000368300 RNF113AO15541 343 aaKnown RBP14.65□□□□□ -0.06
LMNA-206ENST00000368300 F13A1P00488 732 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 CRKLP46109 303 aaKnown RBP14.65□□□□□ -0.06
LMNA-206ENST00000368300 ITPK1Q13572 414 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 ATP2B3Q16720 1220 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 Q6ZUG5 572 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 MAST3O60307 1309 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 ITGB4P16144 1822 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 ANKRD18BA2A2Z9 1011 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 HSPD1P10809 573 aaKnown RBP14.65□□□□□ -0.06
LMNA-206ENST00000368300 AKAP2Q9Y2D5 859 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 IL6STP40189 918 aaPredicted RBP14.65□□□□□ -0.06
LMNA-206ENST00000368300 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
LMNA-206ENST00000368300 SUSD4Q5VX71 490 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
LMNA-206ENST00000368300 JCADQ9P266 1359 aa14.65□□□□□ -0.06
LMNA-206ENST00000368300 COL16A1Q07092 1604 aaPredicted RBP14.64□□□□□ -0.07
LMNA-206ENST00000368300 LOC102724428A0A0B4J2F2 783 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 HSP90B1P14625 803 aaKnown RBP14.64□□□□□ -0.07
LMNA-206ENST00000368300 SIK1P57059 783 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 TSGA10IPQ3SY00 556 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 RBSNQ9H1K0 784 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 COL14A1Q05707 1796 aaKnown RBP14.64□□□□□ -0.07
LMNA-206ENST00000368300 SH3TC1Q8TE82 1336 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 JAK2O60674 1132 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 HAND2P61296 217 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 BRF1Q92994 677 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 HELLSQ9NRZ9 838 aa14.64□□□□□ -0.07
LMNA-206ENST00000368300 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
LMNA-206ENST00000368300 EIF5P55010 431 aaKnown RBP14.63□□□□□ -0.07
LMNA-206ENST00000368300 ZNF445P59923 1031 aa14.63□□□□□ -0.07
LMNA-206ENST00000368300 FAM98CQ17RN3 349 aaKnown RBP14.63□□□□□ -0.07
LMNA-206ENST00000368300 CCDC87Q9NVE4 849 aa14.63□□□□□ -0.07
LMNA-206ENST00000368300 NAP1L2Q9ULW6 460 aaPredicted RBP14.63□□□□□ -0.07
LMNA-206ENST00000368300 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms