RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
ECHDC1-201ENST00000368287 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
ECHDC1-201ENST00000368287 SHKBP1Q8TBC3 707 aa7.31□□□□□ -1.24
ECHDC1-201ENST00000368287 MYRFLQ96LU7 910 aa7.31□□□□□ -1.24
ECHDC1-201ENST00000368287 UCN2Q96RP3 112 aa7.31□□□□□ -1.24
ECHDC1-201ENST00000368287 RTCBQ9Y3I0 505 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-201ENST00000368287 XYLBO75191 536 aa7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 EGFRP00533 1210 aa7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 IGFBP4P22692 258 aa7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 CD68P34810 354 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 FAM46AQ96IP4 442 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 USP20Q9Y2K6 914 aa7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 GTF3C3Q9Y5Q9 886 aa7.3□□□□□ -1.24
ECHDC1-201ENST00000368287 LINC01387J3KSC0 135 aa7.29□□□□□ -1.24
ECHDC1-201ENST00000368287 MMP20O60882 483 aa7.29□□□□□ -1.24
ECHDC1-201ENST00000368287 CLEC10AQ8IUN9 316 aa7.29□□□□□ -1.24
ECHDC1-201ENST00000368287 ABI1Q8IZP0 508 aa7.29□□□□□ -1.24
ECHDC1-201ENST00000368287 LGR5O75473 907 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 C8AP07357 584 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 SOX18P35713 384 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 CMTR1Q8N1G2 835 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 ADAMTS19Q8TE59 1207 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 FAM83CQ9BQN1 747 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 KRTAP4-2Q9BYR5 136 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 KCNF1Q9H3M0 494 aa7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 ANGEL1Q9UNK9 670 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-201ENST00000368287 POM121CA8CG34 1229 aa7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 HOXD8P13378 290 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 TXNDC11Q6PKC3 985 aa7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 FAM20CQ8IXL6 584 aa7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 RGL4Q8IZJ4 473 aa7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 QTRT2Q9H974 415 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 KCNK4Q9NYG8 393 aa7.27□□□□□ -1.25
ECHDC1-201ENST00000368287 OPLAHO14841 1288 aa7.26□□□□□ -1.25
ECHDC1-201ENST00000368287 SART1O43290 800 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-201ENST00000368287 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
ECHDC1-201ENST00000368287 BEND4Q6ZU67 534 aa7.26□□□□□ -1.25
ECHDC1-201ENST00000368287 WDR64B1ANS9 1081 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 HOXA10P31260 410 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 HDGFL1Q5TGJ6 251 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 KIAA1211Q6ZU35 1233 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 POU5F2Q8N7G0 328 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 VTI1AQ96AJ9 217 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 ASIC4Q96FT7 647 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 LACRTQ9GZZ8 138 aa7.25□□□□□ -1.25
ECHDC1-201ENST00000368287 BMP3P12645 472 aa7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 CDC25BP30305 580 aa7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 POM121Q96HA1 1249 aa7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 PIM2Q9P1W9 311 aa7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 TIMELESSQ9UNS1 1208 aa7.24□□□□□ -1.25
ECHDC1-201ENST00000368287 RAD21O60216 631 aa7.23□□□□□ -1.25
ECHDC1-201ENST00000368287 CDC27P30260 824 aa7.23□□□□□ -1.25
ECHDC1-201ENST00000368287 FAM117BQ6P1L5 589 aa7.23□□□□□ -1.25
ECHDC1-201ENST00000368287 KLHL23Q8NBE8 558 aa7.23□□□□□ -1.25
ECHDC1-201ENST00000368287 GIMAP7Q8NHV1 300 aa7.23□□□□□ -1.25
ECHDC1-201ENST00000368287 MYO19Q96H55 970 aa7.23□□□□□ -1.25
ECHDC1-201ENST00000368287 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
ECHDC1-201ENST00000368287 TREML1Q86YW5 311 aa7.22□□□□□ -1.25
ECHDC1-201ENST00000368287 MFSD14AQ96MC6 490 aa7.22□□□□□ -1.25
ECHDC1-201ENST00000368287 KCNMB2Q9Y691 235 aa7.22□□□□□ -1.25
ECHDC1-201ENST00000368287 FSCN2O14926 492 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 FOXO3O43524 673 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 ATP11AP98196 1134 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 DPYDQ12882 1025 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 ANKRD34AQ69YU3 496 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 NLRP13Q86W25 1043 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 ATG3Q9NT62 314 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 HIF3AQ9Y2N7 669 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 LEMD3Q9Y2U8 911 aa7.21□□□□□ -1.26
ECHDC1-201ENST00000368287 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-201ENST00000368287 PREPP48147 710 aa7.2□□□□□ -1.26
ECHDC1-201ENST00000368287 TP53INP2Q8IXH6 220 aa7.2□□□□□ -1.26
ECHDC1-201ENST00000368287 FOXD4L4Q8WXT5 416 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-201ENST00000368287 FBXL18Q96ME1 805 aa7.2□□□□□ -1.26
ECHDC1-201ENST00000368287 CCDC39Q9UFE4 941 aa7.2□□□□□ -1.26
ECHDC1-201ENST00000368287 TM4SF5O14894 197 aa7.19□□□□□ -1.26
ECHDC1-201ENST00000368287 HYAL2Q12891 473 aa7.19□□□□□ -1.26
ECHDC1-201ENST00000368287 CBLL1Q75N03 491 aa7.19□□□□□ -1.26
ECHDC1-201ENST00000368287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.26
ECHDC1-201ENST00000368287 FAM177BA6PVY3 158 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 GAS2O43903 313 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 ADAM11O75078 769 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 JUNBP17275 347 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 PTK7Q13308 1070 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 MSMPQ1L6U9 139 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 FDX2Q6P4F2 183 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 VSIG10LQ86VR7 867 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 OSBPL1AQ9BXW6 950 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 RNF208Q9H0X6 261 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 SEC31BQ9NQW1 1179 aa7.18□□□□□ -1.26
ECHDC1-201ENST00000368287 LRFN2Q9ULH4 789 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms