RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 FAM160A1Q05DH4 1040 aa14.34□□□□□ -0.11
CCT3-203ENST00000368258 GPS2Q13227 327 aa14.34□□□□□ -0.11
CCT3-203ENST00000368258 ARHGAP29Q52LW3 1261 aa14.34□□□□□ -0.11
CCT3-203ENST00000368258 CCDC158Q5M9N0 1113 aa14.34□□□□□ -0.11
CCT3-203ENST00000368258 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
CCT3-203ENST00000368258 PSD3Q9NYI0 1048 aa14.34□□□□□ -0.11
CCT3-203ENST00000368258 EFCAB8A8MWE9 144 aa14.33□□□□□ -0.11
CCT3-203ENST00000368258 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.11
CCT3-203ENST00000368258 SMARCC2Q8TAQ2 1214 aa14.33□□□□□ -0.11
CCT3-203ENST00000368258 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.11
CCT3-203ENST00000368258 GNAT3A8MTJ3 354 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 KINO60870 393 aaKnown RBP14.33□□□□□ -0.12
CCT3-203ENST00000368258 TADA3O75528 432 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 BEND3Q5T5X7 828 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 FCHSD1Q86WN1 690 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 CCAR1Q8IX12 1150 aaKnown RBP14.33□□□□□ -0.12
CCT3-203ENST00000368258 UBXN4Q92575 508 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 BRF1Q92994 677 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 DNAI1Q9UI46 699 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
CCT3-203ENST00000368258 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCT3-203ENST00000368258 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
CCT3-203ENST00000368258 TAF7Q15545 349 aaPredicted RBP14.32□□□□□ -0.12
CCT3-203ENST00000368258 EID1Q9Y6B2 187 aa14.32□□□□□ -0.12
CCT3-203ENST00000368258 PSME1Q06323 249 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 ARMCX5Q6P1M9 558 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 AOPEPQ8N6M6 819 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 IQUBQ8NA54 791 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 METP08581 1390 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 MRC1P22897 1456 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 NCAPD2Q15021 1401 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 H3BQV1 296 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
CCT3-203ENST00000368258 NBPF7P0C2Y1 421 aaPredicted RBP14.31□□□□□ -0.12
CCT3-203ENST00000368258 HSPA1LP34931 641 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 LRRFIP1Q32MZ4 808 aaKnown RBP14.31□□□□□ -0.12
CCT3-203ENST00000368258 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
CCT3-203ENST00000368258 GOLPH3LQ9H4A5 285 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
CCT3-203ENST00000368258 TMEM2Q9UHN6 1383 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
CCT3-203ENST00000368258 XIRP1Q702N8 1843 aaKnown RBP14.3□□□□□ -0.12
CCT3-203ENST00000368258 A0A1W2PQ27 194 aa14.3□□□□□ -0.12
CCT3-203ENST00000368258 A0A1W2PQ64 194 aa14.3□□□□□ -0.12
CCT3-203ENST00000368258 A0A1W2PQD8 194 aa14.3□□□□□ -0.12
CCT3-203ENST00000368258 OS9Q13438 667 aaPredicted RBP14.3□□□□□ -0.12
CCT3-203ENST00000368258 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
CCT3-203ENST00000368258 TRIM34Q9BYJ4 488 aa14.3□□□□□ -0.12
CCT3-203ENST00000368258 NWD1Q149M9 1564 aa14.3□□□□□ -0.12
CCT3-203ENST00000368258 LRRN4CLQ8ND94 238 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 RASSF4Q9H2L5 321 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 JAK2O60674 1132 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 DTNBO60941 627 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 ALDH1L1O75891 902 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 TRIM65Q6PJ69 517 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 MSL3Q8N5Y2 521 aaKnown RBP14.29□□□□□ -0.12
CCT3-203ENST00000368258 GPR161Q8N6U8 529 aaKnown RBP14.29□□□□□ -0.12
CCT3-203ENST00000368258 MNS1Q8NEH6 495 aa14.29□□□□□ -0.12
CCT3-203ENST00000368258 BCL11BQ9C0K0 894 aaPredicted RBP14.29□□□□□ -0.12
CCT3-203ENST00000368258 ACEP12821 1306 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 NUTM2FA1L443 756 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 TBC1D8O95759 1140 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 NUTM2GQ5VZR2 741 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 FMR1NBQ8N0W7 255 aaPredicted RBP14.28□□□□□ -0.12
CCT3-203ENST00000368258 GOLGA5Q8TBA6 731 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 EYA1Q99502 592 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 MPHOSPH8Q99549 860 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 TMX1Q9H3N1 280 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
CCT3-203ENST00000368258 YY1AP1Q9H869 796 aa14.28□□□□□ -0.12
CCT3-203ENST00000368258 A0A0D9SFI3 127 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 GOLGA6L9A6NEM1 432 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 IKBKBO14920 756 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 MYO1BO43795 1136 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 PFKFB2O60825 505 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 COL9A3Q14050 684 aaPredicted RBP14.27□□□□□ -0.12
CCT3-203ENST00000368258 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 CC2D1AQ6P1N0 951 aaPredicted RBP14.27□□□□□ -0.12
CCT3-203ENST00000368258 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.12
CCT3-203ENST00000368258 MRPS27Q92552 414 aaKnown RBP14.27□□□□□ -0.12
CCT3-203ENST00000368258 AK7Q96M32 723 aa14.27□□□□□ -0.12
CCT3-203ENST00000368258 XPO4Q9C0E2 1151 aaKnown RBP14.27□□□□□ -0.12
CCT3-203ENST00000368258 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.13
CCT3-203ENST00000368258 TMC6Q7Z403 805 aa14.27□□□□□ -0.13
CCT3-203ENST00000368258 FSIP1Q8NA03 581 aa14.27□□□□□ -0.13
CCT3-203ENST00000368258 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.13
CCT3-203ENST00000368258 IL17REQ8NFR9 667 aa14.27□□□□□ -0.13
CCT3-203ENST00000368258 SMARCE1Q969G3 411 aa14.27□□□□□ -0.13
CCT3-203ENST00000368258 NEK1Q96PY6 1258 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms