RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CCT4P50991 539 aaKnown RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 MRPS9P82933 396 aaKnown RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 DPP8Q6V1X1 898 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 CTNNBL1Q8WYA6 563 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 KIF3CO14782 793 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 FAM43BQ6ZT52 329 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 CRNKL1Q9BZJ0 848 aaKnown RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 KIF28PB7ZC32 967 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 MAP2K1Q02750 393 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-206ENST00000367253 FKBP4Q02790 459 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNE1-206ENST00000367253 TRIML1Q8N9V2 468 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 NIP7Q9Y221 180 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNE1-206ENST00000367253 SAMM50Q9Y512 469 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 NBPF11Q86T75 865 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 ZNF428Q96B54 188 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 HAUS2Q9NVX0 235 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 PREX2Q70Z35 1606 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 DALRD3Q5D0E6 543 aaKnown RBP9.87□□□□□ -0.83
SYNE1-206ENST00000367253 PPFIBP1Q86W92 1011 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 CEP57Q86XR8 500 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-206ENST00000367253 ATP7AQ04656 1500 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 TTF1Q15361 905 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-206ENST00000367253 CFAP74Q9C0B2 1584 aa9.87□□□□□ -0.83
SYNE1-206ENST00000367253 PPIP5K2O43314 1243 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 ZNF500O60304 480 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-206ENST00000367253 PDCP20941 246 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 LCA5Q86VQ0 697 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 POLR3GO15318 223 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-206ENST00000367253 MVPQ14764 893 aaKnown RBP9.86□□□□□ -0.83
SYNE1-206ENST00000367253 DLGAP5Q15398 846 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 RETREG2Q8NC44 543 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 MORC4Q8TE76 937 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 RMI1Q9H9A7 625 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 CFAP45Q9UL16 551 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 DKC1O60832 514 aaKnown RBP eCLIP9.86□□□□□ -0.83
SYNE1-206ENST00000367253 UQCRFS1P1P0C7P4 283 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 YY1P25490 414 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 RFC1P35251 1148 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-206ENST00000367253 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 CEP63Q96MT8 703 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 SERPINC1P01008 464 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 CFAP70Q5T0N1 1121 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 TTLL7Q6ZT98 887 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 HYPKQ9NX55 129 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 GCC2Q8IWJ2 1684 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 A0A1B0GUL7 405 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-206ENST00000367253 KIF5BP33176 963 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 PEX19P40855 299 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 MCM2P49736 904 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 FAM47CQ5HY64 1035 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 ODR4Q5SWX8 454 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 PPP4R4Q6NUP7 873 aa9.86□□□□□ -0.83
SYNE1-206ENST00000367253 NSD3Q9BZ95 1437 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 SNRPA1P09661 255 aaKnown RBP9.85□□□□□ -0.83
SYNE1-206ENST00000367253 SRGAP2BP0DMP2 458 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 KRT23Q9C075 422 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 OSBPP22059 807 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 MAP9Q49MG5 647 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 FAM193BQ96PV7 902 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-206ENST00000367253 PZPP20742 1482 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 BRPF1P55201 1214 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-206ENST00000367253 FILIP1Q7Z7B0 1213 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 LOC102724159A0A0B4J2E5 919 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 PWP2Q15269 919 aaKnown RBP9.85□□□□□ -0.83
SYNE1-206ENST00000367253 PARP10Q53GL7 1025 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 FAM177A1Q8N128 213 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-206ENST00000367253 GTF3C6Q969F1 213 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 ARHGEF10LQ9HCE6 1279 aa9.85□□□□□ -0.83
SYNE1-206ENST00000367253 CBFA2T2O43439 604 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ARID5AQ03989 594 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 RNF187Q5TA31 235 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-206ENST00000367253 TTC37Q6PGP7 1564 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 TTC6Q86TZ1 520 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 GNAI2P04899 355 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 SMC1AQ14683 1233 aaKnown RBP9.84□□□□□ -0.83
SYNE1-206ENST00000367253 LUZP1Q86V48 1076 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 PRPF31Q8WWY3 499 aaKnown RBP9.84□□□□□ -0.83
SYNE1-206ENST00000367253 PRKRIP1Q9H875 184 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ADGBQ8N7X0 1667 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ABCC1P33527 1531 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 SAMD9LQ8IVG5 1584 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 PPM1EQ8WY54 764 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 AP5M1Q9H0R1 490 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 MYBBP1AQ9BQG0 1328 aaKnown RBP9.84□□□□□ -0.83
SYNE1-206ENST00000367253 TTC36A6NLP5 189 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ZBED4O75132 1171 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 CDC45O75419 566 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 SLC8A3P57103 927 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 SESN3P58005 492 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ZNF354CQ86Y25 554 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ERMNQ8TAM6 284 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 PUS7Q96PZ0 661 aaKnown RBP9.84□□□□□ -0.83
SYNE1-206ENST00000367253 NAPBQ9H115 298 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 LRFN2Q9ULH4 789 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms