RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TDRD7Q8NHU6 1098 aaKnown RBP9.59□□□□□ -0.87
CD46-208ENST00000367042 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 A0A1B0GVL5 298 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 PTPDC1A2A3K4 754 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
CD46-208ENST00000367042 TAF5LO75529 589 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 STK38Q15208 465 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 ELF2Q15723 593 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 COPS6Q7L5N1 327 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 XAGE3Q8WTP9 111 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 IL17RAQ96F46 866 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 OGFRQ9NZT2 677 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 CHD2O14647 1828 aaKnown RBP9.58□□□□□ -0.88
CD46-208ENST00000367042 PDIA4P13667 645 aaKnown RBP9.58□□□□□ -0.88
CD46-208ENST00000367042 SCRN1Q12765 414 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 UTP14CQ5TAP6 766 aaKnown RBP9.58□□□□□ -0.88
CD46-208ENST00000367042 PLA2G4DQ86XP0 818 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 KIF18AQ8NI77 898 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 USP28Q96RU2 1077 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 DBNDD2Q9BQY9 259 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 NAT10Q9H0A0 1025 aaKnown RBP9.58□□□□□ -0.88
CD46-208ENST00000367042 ANO10Q9NW15 660 aa9.58□□□□□ -0.88
CD46-208ENST00000367042 RNMTO43148 476 aaKnown RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 CYP21A2P08686 494 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 HAND2P61296 217 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 GNL2Q13823 731 aaKnown RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 TMC6Q7Z403 805 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 ANKRD7Q92527 254 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 ZSCAN16Q9H4T2 348 aaPredicted RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 ZNF396Q96N95 335 aaPredicted RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 FEZ1Q99689 392 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 FMN2Q9NZ56 1722 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 IP6K1Q92551 441 aa9.57□□□□□ -0.88
CD46-208ENST00000367042 DBNLQ9UJU6 430 aaKnown RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 MARF1Q9Y4F3 1742 aaKnown RBP9.57□□□□□ -0.88
CD46-208ENST00000367042 CPLX1O14810 134 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 CTIFO43310 598 aaKnown RBP9.56□□□□□ -0.88
CD46-208ENST00000367042 HOXB7P09629 217 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 TPM4P67936 248 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 RESTQ13127 1097 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 WASHC4Q2M389 1173 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 MCMDC2Q4G0Z9 681 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 EPHA10Q5JZY3 1008 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 STK11IPQ8N1F8 1099 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
CD46-208ENST00000367042 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 A0A087WZG4 1122 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 KIF20AO95235 890 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 ZC3H6P61129 1189 aaKnown RBP9.56□□□□□ -0.88
CD46-208ENST00000367042 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
CD46-208ENST00000367042 MTX1Q13505 466 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 SNW1Q13573 536 aaKnown RBP9.56□□□□□ -0.88
CD46-208ENST00000367042 HSP90AA4PQ58FG1 418 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 TTC5Q8N0Z6 440 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 CCDC85AQ96PX6 553 aaPredicted RBP9.56□□□□□ -0.88
CD46-208ENST00000367042 TMX1Q9H3N1 280 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 GOLPH3LQ9H4A5 285 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 SYT10Q6XYQ8 523 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 SYNE3Q6ZMZ3 975 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 ZBTB9Q96C00 473 aa9.56□□□□□ -0.88
CD46-208ENST00000367042 PIK3C2AO00443 1686 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 PXDNLA1KZ92 1463 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 CTAGE5O15320 804 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 CDK11BP21127 795 aaKnown RBP9.55□□□□□ -0.88
CD46-208ENST00000367042 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
CD46-208ENST00000367042 TIMM10P62072 90 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
CD46-208ENST00000367042 PTPN21Q16825 1174 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 HSP90AB3PQ58FF7 597 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 KAZALD1Q96I82 304 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 SNRKQ9NRH2 765 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 IFNKQ9P0W0 207 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 CTNNA3Q9UI47 895 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
CD46-208ENST00000367042 CCAR2Q8N163 923 aaKnown RBP9.55□□□□□ -0.88
CD46-208ENST00000367042 KRT222Q8N1A0 295 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 RAPGEF4Q8WZA2 1011 aa9.55□□□□□ -0.88
CD46-208ENST00000367042 DDX21Q9NR30 783 aaKnown RBP eCLIP9.55□□□□□ -0.88
CD46-208ENST00000367042 IGKV5-2P06315 115 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 AMOTQ4VCS5 1084 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 USP54Q70EL1 1684 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 NEMFO60524 1076 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
CD46-208ENST00000367042 CAVIN2O95810 425 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 FAM160A1Q05DH4 1040 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 GCKRQ14397 625 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 ANKRD13DQ6ZTN6 518 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
CD46-208ENST00000367042 ZNF397Q8NF99 534 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms