RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
ATF3-206ENST00000366987 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
ATF3-206ENST00000366987 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
ATF3-206ENST00000366987 ZNF215Q9UL58 517 aaPredicted RBP11.74□□□□□ -0.53
ATF3-206ENST00000366987 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
ATF3-206ENST00000366987 CHUKO15111 745 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 NEMFO60524 1076 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 ELF2Q15723 593 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 KCNB2Q92953 911 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 SLC12A5Q9H2X9 1139 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.73□□□□□ -0.53
ATF3-206ENST00000366987 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
ATF3-206ENST00000366987 ROBO1Q9Y6N7 1651 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 CD163L1Q9NR16 1453 aa11.73□□□□□ -0.53
ATF3-206ENST00000366987 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 OAS2P29728 719 aaKnown RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 CLCN6P51797 869 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 SLC8A3P57103 927 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 ANKRD45Q5TZF3 282 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 C17orf50Q8WW18 174 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 PLEKHG4BQ96PX9 1271 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 A0A1W2PP64 1363 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 H7C1W4 665 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 ALDH1B1P30837 517 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 LMAN1P49257 510 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 SFSWAPQ12872 951 aaKnown RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 HHATQ5VTY9 493 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 NGDNQ8NEJ9 315 aaKnown RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 THOC1Q96FV9 657 aaKnown RBP11.72□□□□□ -0.53
ATF3-206ENST00000366987 BATF3Q9NR55 127 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 ABCF2Q9UG63 623 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 NRKQ7Z2Y5 1582 aa11.72□□□□□ -0.53
ATF3-206ENST00000366987 ACEP12821 1306 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 POLR3GO15318 223 aaPredicted RBP11.71□□□□□ -0.53
ATF3-206ENST00000366987 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 ZNF280DQ6N043 979 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 RTF1Q92541 710 aaKnown RBP11.71□□□□□ -0.53
ATF3-206ENST00000366987 N4BP2L2Q92802 583 aaPredicted RBP11.71□□□□□ -0.53
ATF3-206ENST00000366987 RMDN2Q96LZ7 410 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 ORAI2Q96SN7 254 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
ATF3-206ENST00000366987 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.53
ATF3-206ENST00000366987 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
ATF3-206ENST00000366987 UBAP1LF5GYI3 381 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 SMC1AQ14683 1233 aaKnown RBP11.7□□□□□ -0.54
ATF3-206ENST00000366987 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 WLSQ5T9L3 541 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 UTP6Q9NYH9 597 aaKnown RBP11.7□□□□□ -0.54
ATF3-206ENST00000366987 PDZRN3Q9UPQ7 1066 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 USP6P35125 1406 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 PPFIA4O75335 1185 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 CCNHP51946 323 aaPredicted RBP11.7□□□□□ -0.54
ATF3-206ENST00000366987 CCDC178Q5BJE1 867 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 LRRC31Q6UY01 552 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 CXorf38Q8TB03 319 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 MIPOL1Q8TD10 442 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 CABS1Q96KC9 395 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 SRRTQ9BXP5 876 aaKnown RBP11.7□□□□□ -0.54
ATF3-206ENST00000366987 L2HGDHQ9H9P8 463 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
ATF3-206ENST00000366987 ATXN2Q99700 1313 aaKnown RBP11.7□□□□□ -0.54
ATF3-206ENST00000366987 AHDC1Q5TGY3 1603 aaPredicted RBP11.69□□□□□ -0.54
ATF3-206ENST00000366987 TPD52L2O43399 206 aaKnown RBP11.69□□□□□ -0.54
ATF3-206ENST00000366987 SCRN1Q12765 414 aa11.69□□□□□ -0.54
ATF3-206ENST00000366987 NAA30Q147X3 362 aaPredicted RBP11.69□□□□□ -0.54
ATF3-206ENST00000366987 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
ATF3-206ENST00000366987 C16orf45Q96MC5 204 aaPredicted RBP11.69□□□□□ -0.54
ATF3-206ENST00000366987 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
ATF3-206ENST00000366987 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
ATF3-206ENST00000366987 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
ATF3-206ENST00000366987 RBM47A0AV96 593 aaKnown RBP11.68□□□□□ -0.54
ATF3-206ENST00000366987 EPB41L2O43491 1005 aaKnown RBP11.68□□□□□ -0.54
ATF3-206ENST00000366987 ECEL1O95672 775 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 OATP04181 439 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 NBPF7P0C2Y1 421 aaPredicted RBP11.68□□□□□ -0.54
ATF3-206ENST00000366987 RAB27AP51159 221 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 TPD52L1Q16890 204 aaPredicted RBP11.68□□□□□ -0.54
ATF3-206ENST00000366987 KLHL10Q6JEL2 608 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 NME8Q8N427 588 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 IFT57Q9NWB7 429 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 ODF2LQ9ULJ1 636 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 FRMD4BQ9Y2L6 1034 aa11.68□□□□□ -0.54
ATF3-206ENST00000366987 RIPOR2Q9Y4F9 1068 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms