RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 C9orf78Q9NZ63 289 aaPredicted RBP10.67□□□□□ -0.7
PACRG-203ENST00000366889 PDZRN3Q9UPQ7 1066 aa10.67□□□□□ -0.7
PACRG-203ENST00000366889 C4AP0C0L4 1744 aa10.67□□□□□ -0.7
PACRG-203ENST00000366889 SBF1O95248 1867 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 SSFA2P28290 1259 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 CASP7P55210 303 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 FOXK1P85037 733 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 MTX1Q13505 466 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 DSG2Q14126 1118 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 C16orf71Q8IYS4 520 aaPredicted RBP10.66□□□□□ -0.7
PACRG-203ENST00000366889 CCDC191Q8NCU4 936 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
PACRG-203ENST00000366889 RTCBQ9Y3I0 505 aaKnown RBP10.66□□□□□ -0.7
PACRG-203ENST00000366889 ARFGEF1Q9Y6D6 1849 aa10.66□□□□□ -0.7
PACRG-203ENST00000366889 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 H7C1W4 665 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 PDE4AP27815 886 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 NUCB1Q02818 461 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 DOK7Q18PE1 504 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 HSP90AB3PQ58FF7 597 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 SSH3Q8TE77 659 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 KAZALD1Q96I82 304 aa10.65□□□□□ -0.7
PACRG-203ENST00000366889 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.7
PACRG-203ENST00000366889 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.7
PACRG-203ENST00000366889 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
PACRG-203ENST00000366889 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
PACRG-203ENST00000366889 TRAPPC3LQ5T215 181 aa10.64□□□□□ -0.71
PACRG-203ENST00000366889 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
PACRG-203ENST00000366889 SUCLG2Q96I99 432 aa10.64□□□□□ -0.71
PACRG-203ENST00000366889 CWC25Q9NXE8 425 aaPredicted RBP10.64□□□□□ -0.71
PACRG-203ENST00000366889 SRP68Q9UHB9 627 aaKnown RBP10.64□□□□□ -0.71
PACRG-203ENST00000366889 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
PACRG-203ENST00000366889 A0A087WZG4 1122 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
PACRG-203ENST00000366889 HLFQ16534 295 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 PPP1R42Q7Z4L9 355 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
PACRG-203ENST00000366889 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 FLAD1Q8NFF5 587 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 TBC1D2BQ9UPU7 963 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 C10orf71Q711Q0 1435 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 RFC4P35249 363 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 CHD1LQ86WJ1 897 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 PLPP6Q8IY26 295 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
PACRG-203ENST00000366889 LARP6Q9BRS8 491 aaKnown RBP10.63□□□□□ -0.71
PACRG-203ENST00000366889 NUP98P52948 1817 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 PDE4DIPQ5VU43 2346 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 FOXN1O15353 648 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 GYS1P13807 737 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 RABL6Q3YEC7 729 aaPredicted RBP10.62□□□□□ -0.71
PACRG-203ENST00000366889 UBE3BQ7Z3V4 1068 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 BICC1Q9H694 974 aaKnown RBP10.62□□□□□ -0.71
PACRG-203ENST00000366889 BCS1LQ9Y276 419 aa10.62□□□□□ -0.71
PACRG-203ENST00000366889 BCORQ6W2J9 1755 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 USP42Q9H9J4 1324 aaKnown RBP10.61□□□□□ -0.71
PACRG-203ENST00000366889 SRGAP3O43295 1099 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 PCCAP05165 728 aaPredicted RBP10.61□□□□□ -0.71
PACRG-203ENST00000366889 MFSD10Q14728 455 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 EPHA10Q5JZY3 1008 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 C9orf131Q5VYM1 1079 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 ARHGAP27Q6ZUM4 889 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 RRAGCQ9HB90 399 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
PACRG-203ENST00000366889 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
PACRG-203ENST00000366889 RGS3P49796 1198 aa10.6□□□□□ -0.71
PACRG-203ENST00000366889 FOXO4P98177 505 aa10.6□□□□□ -0.71
PACRG-203ENST00000366889 USPL1Q5W0Q7 1092 aa10.6□□□□□ -0.71
PACRG-203ENST00000366889 ZBTB38Q8NAP3 1195 aaPredicted RBP10.6□□□□□ -0.71
PACRG-203ENST00000366889 JARID2Q92833 1246 aaPredicted RBP10.6□□□□□ -0.71
PACRG-203ENST00000366889 PLA2G12BQ9BX93 195 aa10.6□□□□□ -0.71
PACRG-203ENST00000366889 LNPKQ9C0E8 428 aa10.6□□□□□ -0.71
PACRG-203ENST00000366889 CDHR2Q9BYE9 1310 aa10.6□□□□□ -0.71
PACRG-203ENST00000366889 RAB11FIP3O75154 756 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 SMC1BQ8NDV3 1235 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 DDX27Q96GQ7 796 aaKnown RBP10.59□□□□□ -0.71
PACRG-203ENST00000366889 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 UBN2Q6ZU65 1347 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 TIAM2Q8IVF5 1701 aa10.59□□□□□ -0.71
PACRG-203ENST00000366889 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 ZPR1O75312 459 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 MMP10P09238 476 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 GPTP24298 496 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 HSP90AB4PQ58FF6 505 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 EXOC6BQ9Y2D4 811 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 CCDC88AQ3V6T2 1871 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 A0A0G2JLW4 131 aa10.58□□□□□ -0.72
PACRG-203ENST00000366889 SURF6O75683 361 aaKnown RBP10.58□□□□□ -0.72
PACRG-203ENST00000366889 RFX5P48382 616 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms