RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 CDC42BPBQ9Y5S2 1711 aa11.9□□□□□ -0.5
H3F3A-201ENST00000366813 ITSN2Q9NZM3 1697 aa11.9□□□□□ -0.51
H3F3A-201ENST00000366813 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
H3F3A-201ENST00000366813 SYT9Q86SS6 491 aa11.89□□□□□ -0.51
H3F3A-201ENST00000366813 C7orf43Q8WVR3 580 aa11.89□□□□□ -0.51
H3F3A-201ENST00000366813 PHACTR1Q9C0D0 580 aa11.89□□□□□ -0.51
H3F3A-201ENST00000366813 NOP53Q9NZM5 478 aaKnown RBP11.89□□□□□ -0.51
H3F3A-201ENST00000366813 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
H3F3A-201ENST00000366813 IQGAP1P46940 1657 aa11.89□□□□□ -0.51
H3F3A-201ENST00000366813 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
H3F3A-201ENST00000366813 MEX3CQ5U5Q3 659 aaKnown RBP11.88□□□□□ -0.51
H3F3A-201ENST00000366813 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
H3F3A-201ENST00000366813 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
H3F3A-201ENST00000366813 A2MP01023 1474 aa11.88□□□□□ -0.51
H3F3A-201ENST00000366813 JCADQ9P266 1359 aa11.88□□□□□ -0.51
H3F3A-201ENST00000366813 ITGB2P05107 769 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 DGKGP49619 791 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 HNRNPMP52272 730 aaKnown RBP eCLIP11.87□□□□□ -0.51
H3F3A-201ENST00000366813 SEC13P55735 322 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 SFSWAPQ12872 951 aaKnown RBP11.87□□□□□ -0.51
H3F3A-201ENST00000366813 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 HINFPQ9BQA5 517 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
H3F3A-201ENST00000366813 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 FAM135AQ9P2D6 1515 aa11.87□□□□□ -0.51
H3F3A-201ENST00000366813 SCG3Q8WXD2 468 aaKnown RBP11.86□□□□□ -0.51
H3F3A-201ENST00000366813 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 LRP6O75581 1613 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 SETBP1Q9Y6X0 1596 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 CLIP1P30622 1438 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 ELOA3CA0A087WX78 387 aaPredicted RBP11.86□□□□□ -0.51
H3F3A-201ENST00000366813 ELOA3DA6NLF2 546 aaPredicted RBP11.86□□□□□ -0.51
H3F3A-201ENST00000366813 HIRAP54198 1017 aaPredicted RBP11.86□□□□□ -0.51
H3F3A-201ENST00000366813 ELOA3BQ3SY89 546 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 ELOA3Q8NG57 546 aa11.86□□□□□ -0.51
H3F3A-201ENST00000366813 XIRP1Q702N8 1843 aaKnown RBP11.85□□□□□ -0.51
H3F3A-201ENST00000366813 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
H3F3A-201ENST00000366813 MIA2Q96PC5 1412 aa11.85□□□□□ -0.51
H3F3A-201ENST00000366813 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
H3F3A-201ENST00000366813 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
H3F3A-201ENST00000366813 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
H3F3A-201ENST00000366813 NGLY1Q96IV0 654 aa11.84□□□□□ -0.51
H3F3A-201ENST00000366813 HSH2DQ96JZ2 352 aa11.84□□□□□ -0.51
H3F3A-201ENST00000366813 SUSD3Q96L08 255 aa11.84□□□□□ -0.51
H3F3A-201ENST00000366813 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
H3F3A-201ENST00000366813 SIN3BO75182 1162 aa11.83□□□□□ -0.52
H3F3A-201ENST00000366813 DKK1O94907 266 aa11.83□□□□□ -0.52
H3F3A-201ENST00000366813 PROCP04070 461 aa11.83□□□□□ -0.52
H3F3A-201ENST00000366813 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.52
H3F3A-201ENST00000366813 SLC30A3Q99726 388 aa11.83□□□□□ -0.52
H3F3A-201ENST00000366813 ATP7AQ04656 1500 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 C21orf2O43822 256 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 SPEM2Q0P670 501 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 ARXQ96QS3 562 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 VRTNQ9H8Y1 702 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 KCNH4Q9UQ05 1017 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
H3F3A-201ENST00000366813 PZPP20742 1482 aa11.81□□□□□ -0.52
H3F3A-201ENST00000366813 NLRP1Q9C000 1473 aa11.81□□□□□ -0.52
H3F3A-201ENST00000366813 CDK12Q9NYV4 1490 aaPredicted RBP11.81□□□□□ -0.52
H3F3A-201ENST00000366813 LMOD1P29536 600 aaPredicted RBP11.81□□□□□ -0.52
H3F3A-201ENST00000366813 HIF1AQ16665 826 aa11.81□□□□□ -0.52
H3F3A-201ENST00000366813 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
H3F3A-201ENST00000366813 ZNF280CQ8ND82 737 aa11.81□□□□□ -0.52
H3F3A-201ENST00000366813 C2orf49Q9BVC5 232 aaPredicted RBP11.81□□□□□ -0.52
H3F3A-201ENST00000366813 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
H3F3A-201ENST00000366813 LOC100996750A0A140TA64 210 aa11.8□□□□□ -0.52
H3F3A-201ENST00000366813 LTKP29376 864 aa11.8□□□□□ -0.52
H3F3A-201ENST00000366813 DPYDQ12882 1025 aa11.8□□□□□ -0.52
H3F3A-201ENST00000366813 KRTAP4-6Q9BYQ5 205 aa11.8□□□□□ -0.52
H3F3A-201ENST00000366813 SPATA31A6Q5VVP1 1343 aa11.8□□□□□ -0.52
H3F3A-201ENST00000366813 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
H3F3A-201ENST00000366813 ZC3H13Q5T200 1668 aaKnown RBP11.79□□□□□ -0.52
H3F3A-201ENST00000366813 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
H3F3A-201ENST00000366813 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
H3F3A-201ENST00000366813 KDM5DQ9BY66 1539 aa11.79□□□□□ -0.52
H3F3A-201ENST00000366813 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
H3F3A-201ENST00000366813 SPDYE3A6NKU9 549 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 ADARB2-AS1A8MUL3 147 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 C1QTNF9BB2RNN3 333 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 RGS12O14924 1447 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 LGR5O75473 907 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 BAG6P46379 1132 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 PTK7Q13308 1070 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
H3F3A-201ENST00000366813 RAB44Q7Z6P3 723 aaPredicted RBP11.78□□□□□ -0.52
H3F3A-201ENST00000366813 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
H3F3A-201ENST00000366813 KIF3BO15066 747 aa11.77□□□□□ -0.53
H3F3A-201ENST00000366813 ADAM23O75077 832 aa11.77□□□□□ -0.53
H3F3A-201ENST00000366813 RFX1P22670 979 aa11.77□□□□□ -0.53
H3F3A-201ENST00000366813 KCNQ4P56696 695 aa11.77□□□□□ -0.53
H3F3A-201ENST00000366813 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
H3F3A-201ENST00000366813 AFF2P51816 1311 aa11.76□□□□□ -0.53
H3F3A-201ENST00000366813 TYRO3Q06418 890 aa11.76□□□□□ -0.53
H3F3A-201ENST00000366813 BTLAQ7Z6A9 289 aa11.76□□□□□ -0.53
H3F3A-201ENST00000366813 ANKMY2Q8IV38 441 aa11.76□□□□□ -0.53
H3F3A-201ENST00000366813 TNFRSF25Q93038 417 aa11.76□□□□□ -0.53
H3F3A-201ENST00000366813 BHMTQ93088 406 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms