RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 KDM5AP29375 1690 aaKnown RBP11.62□□□□□ -0.55
YBX3-204ENST00000366290 FIGNL2A6NMB9 653 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.55
YBX3-204ENST00000366290 COX20Q5RI15 118 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 PRICKLE2Q7Z3G6 844 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 ALDH16A1Q8IZ83 802 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
YBX3-204ENST00000366290 MYO19Q96H55 970 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 BIN2Q9UBW5 565 aaPredicted RBP11.62□□□□□ -0.55
YBX3-204ENST00000366290 POLR1AO95602 1720 aaPredicted RBP11.62□□□□□ -0.55
YBX3-204ENST00000366290 TET3O43151 1660 aa11.62□□□□□ -0.55
YBX3-204ENST00000366290 NOS1P29475 1434 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 UBR1Q8IWV7 1749 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 PHKA2P46019 1235 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 POU4F2Q12837 409 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 LYSMD3Q7Z3D4 306 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 PHACTR1Q9C0D0 580 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
YBX3-204ENST00000366290 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
YBX3-204ENST00000366290 MED14O60244 1454 aa11.6□□□□□ -0.55
YBX3-204ENST00000366290 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
YBX3-204ENST00000366290 LRFN2Q9ULH4 789 aa11.6□□□□□ -0.55
YBX3-204ENST00000366290 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
YBX3-204ENST00000366290 SYNMO15061 1565 aa11.59□□□□□ -0.55
YBX3-204ENST00000366290 PPFIA3O75145 1194 aa11.59□□□□□ -0.55
YBX3-204ENST00000366290 TXLNAP40222 546 aa11.59□□□□□ -0.55
YBX3-204ENST00000366290 RTN1Q16799 776 aa11.59□□□□□ -0.55
YBX3-204ENST00000366290 IRF7Q92985 503 aa11.59□□□□□ -0.55
YBX3-204ENST00000366290 ARHGAP23Q9P227 1491 aa11.58□□□□□ -0.56
YBX3-204ENST00000366290 VSIG8P0DPA2 414 aa11.58□□□□□ -0.56
YBX3-204ENST00000366290 HSPA1LP34931 641 aa11.58□□□□□ -0.56
YBX3-204ENST00000366290 PTSQ03393 145 aa11.58□□□□□ -0.56
YBX3-204ENST00000366290 AIDAQ96BJ3 306 aa11.58□□□□□ -0.56
YBX3-204ENST00000366290 SLIT1O75093 1534 aa11.58□□□□□ -0.56
YBX3-204ENST00000366290 PIK3C2BO00750 1634 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 TNFRSF10BO14763 440 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 RHOQP17081 205 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 GMPRP36959 345 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 ECM1Q16610 540 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 WDR44Q5JSH3 913 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 C1orf53Q5VUE5 145 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 ANKLE2Q86XL3 938 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 ZDHHC3Q9NYG2 299 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 NAIPQ13075 1403 aa11.57□□□□□ -0.56
YBX3-204ENST00000366290 E9PCH4 1651 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 HFM1A2PYH4 1435 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 FAM13AO94988 1023 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 NPR3P17342 541 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 MPSTP25325 297 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 STIM2Q9P246 746 aa11.56□□□□□ -0.56
YBX3-204ENST00000366290 CPS1P31327 1500 aa11.55□□□□□ -0.56
YBX3-204ENST00000366290 STRCP1A6NGW2 1772 aa11.55□□□□□ -0.56
YBX3-204ENST00000366290 ITGAEP38570 1179 aa11.55□□□□□ -0.56
YBX3-204ENST00000366290 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
YBX3-204ENST00000366290 DGKZQ13574 1117 aa11.55□□□□□ -0.56
YBX3-204ENST00000366290 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 IDI1Q13907 227 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 RGS22Q8NE09 1264 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 TIMMDC1Q9NPL8 285 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 IQGAP1P46940 1657 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 NUP155O75694 1391 aa11.54□□□□□ -0.56
YBX3-204ENST00000366290 NPHP4O75161 1426 aaPredicted RBP11.53□□□□□ -0.56
YBX3-204ENST00000366290 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
YBX3-204ENST00000366290 SLC35F4A4IF30 521 aa11.53□□□□□ -0.56
YBX3-204ENST00000366290 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
YBX3-204ENST00000366290 MARSP56192 900 aaKnown RBP11.53□□□□□ -0.56
YBX3-204ENST00000366290 C11orf91Q3C1V1 193 aa11.53□□□□□ -0.56
YBX3-204ENST00000366290 RHPN1Q8TCX5 695 aa11.53□□□□□ -0.56
YBX3-204ENST00000366290 ADGRB3O60242 1522 aa11.53□□□□□ -0.56
YBX3-204ENST00000366290 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
YBX3-204ENST00000366290 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
YBX3-204ENST00000366290 TOM1O60784 492 aa11.52□□□□□ -0.57
YBX3-204ENST00000366290 ATP4AP20648 1035 aa11.52□□□□□ -0.57
YBX3-204ENST00000366290 BRD2P25440 801 aaKnown RBP11.52□□□□□ -0.57
YBX3-204ENST00000366290 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.57
YBX3-204ENST00000366290 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
YBX3-204ENST00000366290 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
YBX3-204ENST00000366290 FAM26DQ5JW98 314 aa11.51□□□□□ -0.57
YBX3-204ENST00000366290 ABTB2Q8N961 1025 aa11.51□□□□□ -0.57
YBX3-204ENST00000366290 LRRC7Q96NW7 1537 aa11.5□□□□□ -0.57
YBX3-204ENST00000366290 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
YBX3-204ENST00000366290 TMEM131LA2VDJ0 1609 aa11.5□□□□□ -0.57
YBX3-204ENST00000366290 LTKP29376 864 aa11.5□□□□□ -0.57
YBX3-204ENST00000366290 EIF1AXP47813 144 aaKnown RBP11.5□□□□□ -0.57
YBX3-204ENST00000366290 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
YBX3-204ENST00000366290 LORP23490 312 aaPredicted RBP11.49□□□□□ -0.57
YBX3-204ENST00000366290 MSX1P28360 303 aa11.49□□□□□ -0.57
YBX3-204ENST00000366290 ALKBH2Q6NS38 261 aa11.49□□□□□ -0.57
YBX3-204ENST00000366290 BICDL1Q6ZP65 573 aa11.49□□□□□ -0.57
YBX3-204ENST00000366290 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
YBX3-204ENST00000366290 IFT43Q96FT9 208 aa11.49□□□□□ -0.57
YBX3-204ENST00000366290 GPC6Q9Y625 555 aaPredicted RBP11.49□□□□□ -0.57
YBX3-204ENST00000366290 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
YBX3-204ENST00000366290 ZBTB39O15060 712 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 INSM1Q01101 510 aaPredicted RBP11.48□□□□□ -0.57
YBX3-204ENST00000366290 HIF1AQ16665 826 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms