RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PTPRTO14522 1441 aa15.52■□□□□ 0.07
LDB3-202ENST00000361373 GNPATO15228 680 aa15.52■□□□□ 0.07
LDB3-202ENST00000361373 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.07
LDB3-202ENST00000361373 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.07
LDB3-202ENST00000361373 B4DLN1 442 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 CALML3P27482 149 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
LDB3-202ENST00000361373 TOP1P11387 765 aaKnown RBP15.51■□□□□ 0.07
LDB3-202ENST00000361373 PA2G4Q9UQ80 394 aaKnown RBP15.51■□□□□ 0.07
LDB3-202ENST00000361373 EYA2O00167 538 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 STX1AQ16623 288 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 RMND1Q9NWS8 449 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 NF2P35240 595 aa15.51■□□□□ 0.07
LDB3-202ENST00000361373 ERVV-2B6SEH9 535 aa15.5■□□□□ 0.07
LDB3-202ENST00000361373 LDHBP07195 334 aaKnown RBP15.5■□□□□ 0.07
LDB3-202ENST00000361373 UBA5Q9GZZ9 404 aa15.5■□□□□ 0.07
LDB3-202ENST00000361373 STK32BQ9NY57 414 aa15.5■□□□□ 0.07
LDB3-202ENST00000361373 ZSCAN22P10073 491 aaPredicted RBP15.5■□□□□ 0.07
LDB3-202ENST00000361373 SNX21Q969T3 373 aa15.5■□□□□ 0.07
LDB3-202ENST00000361373 ALG1Q9BT22 464 aa15.5■□□□□ 0.07
LDB3-202ENST00000361373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
LDB3-202ENST00000361373 PDE8AO60658 829 aa15.5■□□□□ 0.07
LDB3-202ENST00000361373 NMIQ13287 307 aaPredicted RBP15.49■□□□□ 0.07
LDB3-202ENST00000361373 TTC6Q86TZ1 520 aa15.49■□□□□ 0.07
LDB3-202ENST00000361373 EIF3JO75822 258 aaKnown RBP15.49■□□□□ 0.07
LDB3-202ENST00000361373 CCDC144CPQ8IYA2 1237 aa15.49■□□□□ 0.07
LDB3-202ENST00000361373 GTPBP4Q9BZE4 634 aaKnown RBP15.49■□□□□ 0.07
LDB3-202ENST00000361373 HELLSQ9NRZ9 838 aa15.49■□□□□ 0.07
LDB3-202ENST00000361373 IQSEC3Q9UPP2 1182 aaPredicted RBP15.49■□□□□ 0.07
LDB3-202ENST00000361373 GSDMDP57764 484 aa15.49■□□□□ 0.07
LDB3-202ENST00000361373 TFCP2Q12800 502 aa15.49■□□□□ 0.07
LDB3-202ENST00000361373 BICC1Q9H694 974 aaKnown RBP15.49■□□□□ 0.07
LDB3-202ENST00000361373 TFIP11Q9UBB9 837 aaKnown RBP15.49■□□□□ 0.07
LDB3-202ENST00000361373 ABCA8O94911 1581 aa15.49■□□□□ 0.07
LDB3-202ENST00000361373 IDEP14735 1019 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 PRC1O43663 620 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 YEATS4O95619 227 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 AOX1Q06278 1338 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 KIAA0232Q92628 1395 aa15.48■□□□□ 0.07
LDB3-202ENST00000361373 ZBTB7BO15156 539 aaPredicted RBP15.47■□□□□ 0.07
LDB3-202ENST00000361373 USO1O60763 962 aaKnown RBP15.47■□□□□ 0.07
LDB3-202ENST00000361373 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 C6orf50Q9HD87 102 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 CWC15Q9P013 229 aaKnown RBP15.47■□□□□ 0.07
LDB3-202ENST00000361373 MBD5Q9P267 1494 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 PLEKHG1Q9ULL1 1385 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 ESPNB1AK53 854 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 LTKP29376 864 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 TNNI2P48788 182 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
LDB3-202ENST00000361373 ZSCAN30Q86W11 494 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 CCDC171Q6TFL3 1326 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 AXDND1Q5T1B0 1012 aaPredicted RBP15.47■□□□□ 0.07
LDB3-202ENST00000361373 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
LDB3-202ENST00000361373 MCM9Q9NXL9 1143 aa15.47■□□□□ 0.07
LDB3-202ENST00000361373 MAST3O60307 1309 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 TBCAO75347 108 aaKnown RBP15.46■□□□□ 0.07
LDB3-202ENST00000361373 MTIF2P46199 727 aaKnown RBP15.46■□□□□ 0.07
LDB3-202ENST00000361373 Q6ZUG5 572 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 USP37Q86T82 979 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 GBP3Q9H0R5 595 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 KLHL40Q2TBA0 621 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 UVSSAQ2YD98 709 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
LDB3-202ENST00000361373 ADGBQ8N7X0 1667 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 KIF5CO60282 957 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 RLBP1P12271 317 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 FAM177A1Q8N128 213 aaPredicted RBP15.46■□□□□ 0.07
LDB3-202ENST00000361373 RTL1A6NKG5 1358 aa15.46■□□□□ 0.07
LDB3-202ENST00000361373 ZRSR2Q15696 482 aaKnown RBP15.46■□□□□ 0.06
LDB3-202ENST00000361373 SH2D4AQ9H788 454 aa15.46■□□□□ 0.06
LDB3-202ENST00000361373 F8W031 263 aaPredicted RBP15.45■□□□□ 0.06
LDB3-202ENST00000361373 CCDC40Q4G0X9 1142 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 PLEKHM2Q8IWE5 1019 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 MAGEB6Q8N7X4 407 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 LARP6Q9BRS8 491 aaKnown RBP15.45■□□□□ 0.06
LDB3-202ENST00000361373 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 NEBLO76041 1014 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 NEFHP12036 1026 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 SYKP43405 635 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 SEPT7Q16181 437 aaKnown RBP15.45■□□□□ 0.06
LDB3-202ENST00000361373 YEATS2Q9ULM3 1422 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 GNA11P29992 359 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 SPAG1Q07617 926 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 CKAP2LQ8IYA6 745 aa15.45■□□□□ 0.06
LDB3-202ENST00000361373 HELBQ8NG08 1087 aaPredicted RBP15.45■□□□□ 0.06
LDB3-202ENST00000361373 ITGA6P23229 1130 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 PICALMQ13492 652 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 RRP36Q96EU6 259 aaKnown RBP15.44■□□□□ 0.06
LDB3-202ENST00000361373 FAM89AQ96GI7 184 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 KIF24Q5T7B8 1368 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 EFCAB6Q5THR3 1501 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 ZNF165P49910 485 aa15.44■□□□□ 0.06
LDB3-202ENST00000361373 NAPAP54920 295 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms