RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 LRRC27Q9C0I9 530 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 FERMT2Q96AC1 680 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 PSMA7O14818 248 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 HPDP32754 393 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 TRIM7Q9C029 511 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 KLF18A0A0U1RQI7 1052 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 CACNA2D3Q8IZS8 1091 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 RTEL1-TNFRSF6BF6WH68 1400 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 GOLGA6CA6NDK9 693 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 KIF3CO14782 793 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 GOLGA6DP0CG33 693 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 BAG1Q99933 345 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 GOLGA6AQ9NYA3 693 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 VIMP08670 466 aaKnown RBP15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 STAT6P42226 847 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 TNNC1P63316 161 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 UBLCP1Q8WVY7 318 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 PPP4R3AQ6IN85 833 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 ALG1Q9BT22 464 aa15.22■□□□□ 0.03
CCDC144A-203ENST00000360495 ARHGAP25P42331 645 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 STXBP4Q6ZWJ1 553 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 PPP1R9BQ96SB3 815 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 SPTLC2O15270 562 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 OAS2P29728 719 aaKnown RBP15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 CARD6Q9BX69 1037 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 LRRC2Q9BYS8 371 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 BMP15O95972 392 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 ZNF444Q8N0Y2 327 aaPredicted RBP15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 SETSIPP0DME0 302 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 CCDC63Q8NA47 563 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 RABEP2Q9H5N1 569 aa15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 CWC25Q9NXE8 425 aaPredicted RBP15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 MTRF1LQ9UGC7 380 aaKnown RBP15.21■□□□□ 0.03
CCDC144A-203ENST00000360495 CHMP4BP1P59074 171 aa15.21■□□□□ 0.02
CCDC144A-203ENST00000360495 FLIIQ13045 1269 aa15.21■□□□□ 0.02
CCDC144A-203ENST00000360495 SYCP3Q8IZU3 236 aa15.21■□□□□ 0.02
CCDC144A-203ENST00000360495 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 UBXN1Q04323 297 aa15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 RBM8AQ9Y5S9 174 aaKnown RBP15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 A6NNZ2 444 aa15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 TUBB8Q3ZCM7 444 aa15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 PDE1AP54750 535 aa15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 MYCBPQ99417 103 aaPredicted RBP15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 FERMT1Q9BQL6 677 aa15.2■□□□□ 0.02
CCDC144A-203ENST00000360495 CIB2O75838 187 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 PSMC4P43686 418 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 ARID5AQ03989 594 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 MKRN1Q9UHC7 482 aaKnown RBP15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 GBP1P32455 592 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 ZSCAN26Q16670 478 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 CCDC122Q5T0U0 273 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 ALDH3A1P30838 453 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 STX17P56962 302 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 CNGA4Q8IV77 575 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 DHX58Q96C10 678 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 TSNAXIP1Q2TAA8 658 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 RPUSD2Q8IZ73 545 aaKnown RBP15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 CUL5Q93034 780 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
CCDC144A-203ENST00000360495 MAP7D1Q3KQU3 841 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 FAM114A2Q9NRY5 505 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 C9orf84Q5VXU9 1444 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 SF3B2Q13435 895 aaKnown RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 NEDD9Q14511 834 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 TTF1Q15361 905 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 BANK1Q8NDB2 785 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 TTC21AQ8NDW8 1320 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 NAPGQ99747 312 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 NCOA1Q15788 1441 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 AKR1B15C9JRZ8 316 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 TPD52P55327 224 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 Q6ZUG5 572 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 FMNL3Q8IVF7 1028 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 RGS22Q8NE09 1264 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 CCDC110Q8TBZ0 833 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 INTS4Q96HW7 963 aaKnown RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 NKIRAS1Q9NYS0 192 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 CEP85LQ5SZL2 805 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 MFSD6Q6ZSS7 791 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 CEP120Q8N960 986 aa15.18■□□□□ 0.02
CCDC144A-203ENST00000360495 TBCAO75347 108 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms