RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 FAM135BQ49AJ0 1406 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 FBLN1P23142 703 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 PIBF1Q8WXW3 757 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 ACSBG1Q96GR2 724 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 SLC52A2Q9HAB3 445 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 ATL3Q6DD88 541 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 TAF4BQ92750 862 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 SYCE3A1L190 88 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 GOLGA6L9A6NEM1 432 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 RNF113AO15541 343 aaKnown RBP5.6□□□□□ -1.51
SCN3A-202ENST00000360093 CCT2P78371 535 aaKnown RBP5.6□□□□□ -1.51
SCN3A-202ENST00000360093 RTN1Q16799 776 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 UVSSAQ2YD98 709 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 SLC9C2Q5TAH2 1124 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 CACNA2D4Q7Z3S7 1137 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 USP37Q86T82 979 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 SMC5Q8IY18 1101 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 CCDC102BQ68D86 513 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 GBP3Q9H0R5 595 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 SLAIN2Q9P270 581 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 PCDHB15Q9Y5E8 787 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 CHL1O00533 1208 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 RBM28Q9NW13 759 aaKnown RBP5.6□□□□□ -1.51
SCN3A-202ENST00000360093 RBM8AQ9Y5S9 174 aaKnown RBP5.6□□□□□ -1.51
SCN3A-202ENST00000360093 IQGAP3Q86VI3 1631 aa5.6□□□□□ -1.51
SCN3A-202ENST00000360093 FERMT3Q86UX7 667 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 CABLES1Q8TDN4 633 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 PHACTR3Q96KR7 559 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 AATKQ6ZMQ8 1374 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 CCDC172P0C7W6 258 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 MICU3Q86XE3 530 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 SNRKQ9NRH2 765 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 ZRANB1Q9UGI0 708 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 STX8Q9UNK0 236 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 BLMP54132 1417 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 MAST3O60307 1309 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 PDE8AO60658 829 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 USO1O60763 962 aaKnown RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 ZSCAN22P10073 491 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 TOP1P11387 765 aaKnown RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 FSIP1Q8NA03 581 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 PAF1Q8N7H5 531 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 INTS4Q96HW7 963 aaKnown RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 SLC26A6Q9BXS9 759 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 ANXA1P04083 346 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 TNNI2P48788 182 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 TNPO1Q92973 898 aaKnown RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 TFCP2L1Q9NZI6 479 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 KIF5CO60282 957 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 NF2P35240 595 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 CTAGE1Q96RT6 745 aa5.59□□□□□ -1.51
SCN3A-202ENST00000360093 NAP1L4Q99733 375 aaKnown RBP5.59□□□□□ -1.51
SCN3A-202ENST00000360093 KLF18A0A0U1RQI7 1052 aa5.59□□□□□ -1.52
SCN3A-202ENST00000360093 LDHBP07195 334 aaKnown RBP5.59□□□□□ -1.52
SCN3A-202ENST00000360093 SEPT7Q16181 437 aaKnown RBP5.59□□□□□ -1.52
SCN3A-202ENST00000360093 PDCL2Q8N4E4 241 aa5.59□□□□□ -1.52
SCN3A-202ENST00000360093 JDP2Q8WYK2 163 aa5.59□□□□□ -1.52
SCN3A-202ENST00000360093 SPHKAPQ2M3C7 1700 aa5.59□□□□□ -1.52
SCN3A-202ENST00000360093 YEATS4O95619 227 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 PUM3Q15397 648 aaKnown RBP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 SSFA2P28290 1259 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 TMX3Q96JJ7 454 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 BICC1Q9H694 974 aaKnown RBP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 SEPT11Q9NVA2 429 aaKnown RBP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 SH3TC1Q8TE82 1336 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 GNA11P29992 359 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 CAMK4Q16566 473 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 KLHL40Q2TBA0 621 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 ERBB4Q15303 1308 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 CCDC171Q6TFL3 1326 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 ZBTB7BO15156 539 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 FILIP1Q7Z7B0 1213 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 TTC6Q86TZ1 520 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 ALG1Q9BT22 464 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 SH2D4AQ9H788 454 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 HSPA2P54652 639 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 ZSCAN30Q86W11 494 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 SCLT1Q96NL6 688 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 GUCY1B3Q02153 619 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 PPP2R5BQ15173 497 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 CCDC82Q8N4S0 544 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 HOOK2Q96ED9 719 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 GLT8D2Q9H1C3 349 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 C6orf50Q9HD87 102 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 GBP2P32456 591 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 HAND2P61296 217 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 DHX32Q7L7V1 743 aaKnown RBP5.58□□□□□ -1.52
SCN3A-202ENST00000360093 CNBD1Q8NA66 436 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 FLAD1Q8NFF5 587 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 MROH5Q6ZUA9 1318 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 EYA2O00167 538 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 SUPT20HQ8NEM7 779 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 KIF18AQ8NI77 898 aa5.58□□□□□ -1.52
SCN3A-202ENST00000360093 PTPN14Q15678 1187 aa5.57□□□□□ -1.52
SCN3A-202ENST00000360093 WDR66Q8TBY9 1149 aa5.57□□□□□ -1.52
SCN3A-202ENST00000360093 BRF1Q92994 677 aa5.57□□□□□ -1.52
SCN3A-202ENST00000360093 RRP36Q96EU6 259 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms