RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 HMG20BQ9P0W2 317 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 KIDINS220Q9ULH0 1771 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 UFL1O94874 794 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 CRKLP46109 303 aaKnown RBP10.04□□□□□ -0.8
ATG13-201ENST00000359513 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 FAM196AQ6ZSG2 479 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 MAGEB6Q8N7X4 407 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 RBM17Q96I25 401 aaKnown RBP10.04□□□□□ -0.8
ATG13-201ENST00000359513 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 DIP2BQ9P265 1576 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 CLTCQ00610 1675 aaKnown RBP10.04□□□□□ -0.8
ATG13-201ENST00000359513 GLI2P10070 1586 aa10.04□□□□□ -0.8
ATG13-201ENST00000359513 PICALMQ13492 652 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 BEND3Q5T5X7 828 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 FEZ1Q99689 392 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 PPRC1Q5VV67 1664 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 RNF113AO15541 343 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 MYO1BO43795 1136 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 MCM5P33992 734 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 KRT27Q7Z3Y8 459 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 XAGE2Q96GT9 111 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 EYA3Q99504 573 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 PRDM4Q9UKN5 801 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 LDHBP07195 334 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 ZNF853P0CG23 659 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 CHMLP26374 656 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 HIBADHP31937 336 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 ZNF76P36508 570 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 TERF1P54274 439 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 PUM3Q15397 648 aaKnown RBP10.03□□□□□ -0.8
ATG13-201ENST00000359513 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 NDUFB9Q9Y6M9 179 aa10.03□□□□□ -0.8
ATG13-201ENST00000359513 HMGN5P82970 282 aaKnown RBP10.02□□□□□ -0.8
ATG13-201ENST00000359513 GAS2L3Q86XJ1 694 aa10.02□□□□□ -0.8
ATG13-201ENST00000359513 NECAB1Q8N987 351 aa10.02□□□□□ -0.8
ATG13-201ENST00000359513 ZHX3Q9H4I2 956 aa10.02□□□□□ -0.8
ATG13-201ENST00000359513 HDAC9Q9UKV0 1011 aa10.02□□□□□ -0.8
ATG13-201ENST00000359513 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 SSBP05455 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATG13-201ENST00000359513 IARSP41252 1262 aaKnown RBP10.02□□□□□ -0.81
ATG13-201ENST00000359513 PDE4CQ08493 712 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 NOC3LQ8WTT2 800 aaKnown RBP10.02□□□□□ -0.81
ATG13-201ENST00000359513 NAT10Q9H0A0 1025 aaKnown RBP10.02□□□□□ -0.81
ATG13-201ENST00000359513 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
ATG13-201ENST00000359513 ABCC4O15439 1325 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 H0YIN7 160 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 PDIA4P13667 645 aaKnown RBP10.02□□□□□ -0.81
ATG13-201ENST00000359513 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 PTPRMP28827 1452 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 ADAMTS13Q76LX8 1427 aa10.02□□□□□ -0.81
ATG13-201ENST00000359513 SHPRHQ149N8 1683 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 KLF18A0A0U1RQI7 1052 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 CDK12Q9NYV4 1490 aaPredicted RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 IL6STP40189 918 aaPredicted RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 WDR78Q5VTH9 848 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 ESR2Q92731 530 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 FAM13BQ9NYF5 915 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 MAP3K15Q6ZN16 1313 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 CAMSAP1Q5T5Y3 1602 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 CEP89Q96ST8 783 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 VEZTQ9HBM0 779 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 IQSEC2Q5JU85 1478 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 C1orf167Q5SNV9 1468 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 IPO7O95373 1038 aaKnown RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 SSRP1Q08945 709 aaKnown RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 WTAPQ15007 396 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 CHST3Q7LGC8 479 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 ZBTB38Q8NAP3 1195 aaPredicted RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 TFIP11Q9UBB9 837 aaKnown RBP10.01□□□□□ -0.81
ATG13-201ENST00000359513 AFF2P51816 1311 aa10.01□□□□□ -0.81
ATG13-201ENST00000359513 METAP2P50579 478 aaKnown RBP eCLIP10□□□□□ -0.81
ATG13-201ENST00000359513 CERKQ8TCT0 537 aa10□□□□□ -0.81
ATG13-201ENST00000359513 SSH3Q8TE77 659 aa10□□□□□ -0.81
ATG13-201ENST00000359513 LPIN2Q92539 896 aa10□□□□□ -0.81
ATG13-201ENST00000359513 DENND2AQ9ULE3 1009 aa10□□□□□ -0.81
ATG13-201ENST00000359513 NLRP5P59047 1200 aa10□□□□□ -0.81
ATG13-201ENST00000359513 TMX3Q96JJ7 454 aa10□□□□□ -0.81
ATG13-201ENST00000359513 PCCAP05165 728 aaPredicted RBP10□□□□□ -0.81
ATG13-201ENST00000359513 TSPY3P0CV98 308 aa10□□□□□ -0.81
ATG13-201ENST00000359513 TSPY8P0CW00 308 aa10□□□□□ -0.81
ATG13-201ENST00000359513 SSFA2P28290 1259 aa10□□□□□ -0.81
ATG13-201ENST00000359513 KIF5BP33176 963 aa10□□□□□ -0.81
ATG13-201ENST00000359513 DPP8Q6V1X1 898 aaPredicted RBP10□□□□□ -0.81
ATG13-201ENST00000359513 HOMER1Q86YM7 354 aa10□□□□□ -0.81
ATG13-201ENST00000359513 SNX21Q969T3 373 aa10□□□□□ -0.81
ATG13-201ENST00000359513 KRT23Q9C075 422 aa10□□□□□ -0.81
ATG13-201ENST00000359513 OFD1O75665 1012 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms