RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 TIAM1Q13009 1591 aa16.52■□□□□ 0.24
NUP98-203ENST00000359171 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
NUP98-203ENST00000359171 LMOD1P29536 600 aaPredicted RBP16.52■□□□□ 0.24
NUP98-203ENST00000359171 GBP6Q6ZN66 633 aa16.52■□□□□ 0.24
NUP98-203ENST00000359171 SAMD15Q9P1V8 674 aa16.52■□□□□ 0.24
NUP98-203ENST00000359171 NME9Q86XW9 330 aa16.52■□□□□ 0.24
NUP98-203ENST00000359171 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.23
NUP98-203ENST00000359171 BAG3O95817 575 aa16.52■□□□□ 0.23
NUP98-203ENST00000359171 PTGS1P23219 599 aa16.52■□□□□ 0.23
NUP98-203ENST00000359171 LDHAL6AQ6ZMR3 332 aa16.52■□□□□ 0.23
NUP98-203ENST00000359171 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.23
NUP98-203ENST00000359171 ANKIB1Q9P2G1 1089 aa16.52■□□□□ 0.23
NUP98-203ENST00000359171 KRT13P13646 458 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 ANKLE2Q86XL3 938 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 PUF60Q9UHX1 559 aaKnown RBP16.51■□□□□ 0.23
NUP98-203ENST00000359171 TNNC1P63316 161 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 SETDB1Q15047 1291 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 SELENOSQ9BQE4 189 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 CCDC160A6NGH7 325 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 PPFIBP2Q8ND30 876 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 SERPINA10Q9UK55 444 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 PABPN1LA6NDY0 278 aaKnown RBP16.51■□□□□ 0.23
NUP98-203ENST00000359171 CFAP58Q5T655 872 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 GNAQP50148 359 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 MTRF1LQ9UGC7 380 aaKnown RBP16.51■□□□□ 0.23
NUP98-203ENST00000359171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■□□□ 14.2
NUP98-203ENST00000359171 TRAF1Q13077 416 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
NUP98-203ENST00000359171 DDX23Q9BUQ8 820 aaKnown RBP16.5■□□□□ 0.23
NUP98-203ENST00000359171 A0A1B0GUA9 196 aa16.5■□□□□ 0.23
NUP98-203ENST00000359171 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
NUP98-203ENST00000359171 TRIM75PA6NK02 468 aa16.5■□□□□ 0.23
NUP98-203ENST00000359171 LRRC45Q96CN5 670 aa16.5■□□□□ 0.23
NUP98-203ENST00000359171 ZEB2O60315 1214 aa16.5■□□□□ 0.23
NUP98-203ENST00000359171 ASIC1P78348 528 aa16.5■□□□□ 0.23
NUP98-203ENST00000359171 RTN1Q16799 776 aa16.5■□□□□ 0.23
NUP98-203ENST00000359171 BICDL2A1A5D9 508 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 HSP90AA4PQ58FG1 418 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 ZNF569Q5MCW4 686 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 ESR2Q92731 530 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 A6NNZ2 444 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 LACTBP83111 547 aaPredicted RBP16.49■□□□□ 0.23
NUP98-203ENST00000359171 TUBB8Q3ZCM7 444 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 CNGA4Q8IV77 575 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 C10orf67Q8IYJ2 551 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 PPFIA3O75145 1194 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 PHACTR2O75167 634 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
NUP98-203ENST00000359171 ZPR1O75312 459 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 TUBB2AQ13885 445 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 SEPT6Q14141 434 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.49■□□□□ 0.23
NUP98-203ENST00000359171 TUBB2BQ9BVA1 445 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
NUP98-203ENST00000359171 GUCA1BQ9UMX6 200 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 PCDHB15Q9Y5E8 787 aa16.49■□□□□ 0.23
NUP98-203ENST00000359171 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 CRNKL1Q9BZJ0 848 aaKnown RBP16.48■□□□□ 0.23
NUP98-203ENST00000359171 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 CCDC110Q8TBZ0 833 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 B4GALNT4Q76KP1 1039 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 RAB3IL1Q8TBN0 382 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 ATL3Q6DD88 541 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
NUP98-203ENST00000359171 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
NUP98-203ENST00000359171 RHOXF2BP0C7M4 288 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 RHOXF2Q9BQY4 288 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 IFNKQ9P0W0 207 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 PPP2R3AQ06190 1150 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 Q6ZUG5 572 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 KARSQ15046 597 aaKnown RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 GABPB1Q06547 395 aaPredicted RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 CAPZA3Q96KX2 299 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 SSX2IPQ9Y2D8 614 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 EVCP57679 992 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 CABP5Q9NP86 173 aa16.47■□□□□ 0.23
NUP98-203ENST00000359171 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
NUP98-203ENST00000359171 ALDH3A1P30838 453 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 DHX58Q96C10 678 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms