RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
SIRPA-202ENST00000358771 ADCY5O95622 1261 aa16.72■□□□□ 0.27
SIRPA-202ENST00000358771 KBTBD3Q8NAB2 608 aa16.72■□□□□ 0.27
SIRPA-202ENST00000358771 CCDC69A6NI79 296 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
SIRPA-202ENST00000358771 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 CDC37L1Q7L3B6 337 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 FILIP1Q7Z7B0 1213 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.27
SIRPA-202ENST00000358771 CHGBP05060 677 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 ATP5JP18859 108 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 MEX3CQ5U5Q3 659 aaKnown RBP16.71■□□□□ 0.27
SIRPA-202ENST00000358771 FSD2A1L4K1 749 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 RNF113AO15541 343 aaKnown RBP16.71■□□□□ 0.27
SIRPA-202ENST00000358771 RAD21O60216 631 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 XAGE2Q96GT9 111 aa16.71■□□□□ 0.27
SIRPA-202ENST00000358771 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
SIRPA-202ENST00000358771 ITGA6P23229 1130 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 DDB1Q16531 1140 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 G3V3G9 751 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
SIRPA-202ENST00000358771 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
SIRPA-202ENST00000358771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.7■□□□□ 0.26
SIRPA-202ENST00000358771 HMGN5P82970 282 aaKnown RBP16.69■□□□□ 0.26
SIRPA-202ENST00000358771 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
SIRPA-202ENST00000358771 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
SIRPA-202ENST00000358771 ZDHHC9Q9Y397 364 aa16.69■□□□□ 0.26
SIRPA-202ENST00000358771 ISM2Q6H9L7 571 aa16.69■□□□□ 0.26
SIRPA-202ENST00000358771 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
SIRPA-202ENST00000358771 BIN1O00499 593 aa16.69■□□□□ 0.26
SIRPA-202ENST00000358771 SMC2O95347 1197 aa16.69■□□□□ 0.26
SIRPA-202ENST00000358771 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
SIRPA-202ENST00000358771 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
SIRPA-202ENST00000358771 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
SIRPA-202ENST00000358771 TAF5LO75529 589 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 SLC5A1P13866 664 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 ZAP70P43403 619 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 RGS12O14924 1447 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 CLCN1P35523 988 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 MAP4K1Q92918 833 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
SIRPA-202ENST00000358771 ZNF445P59923 1031 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 CUL4AQ13619 759 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 PI16Q6UXB8 463 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
SIRPA-202ENST00000358771 PRC1O43663 620 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
SIRPA-202ENST00000358771 ADORA1P30542 326 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 MCM5P33992 734 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 SSH2Q76I76 1423 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 MIGA1Q8NAN2 632 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
SIRPA-202ENST00000358771 SPATA31A3Q5VYP0 1347 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 WDR17Q8IZU2 1322 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 TRIM22Q8IYM9 498 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 ZNF165P49910 485 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 MTX1Q13505 466 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
SIRPA-202ENST00000358771 MTMR6Q9Y217 621 aa16.66■□□□□ 0.26
SIRPA-202ENST00000358771 NOL10Q9BSC4 688 aaKnown RBP16.65■□□□□ 0.26
SIRPA-202ENST00000358771 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
SIRPA-202ENST00000358771 CYP21A2P08686 494 aa16.65■□□□□ 0.26
SIRPA-202ENST00000358771 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
SIRPA-202ENST00000358771 RANBP6O60518 1105 aaKnown RBP16.65■□□□□ 0.26
SIRPA-202ENST00000358771 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
SIRPA-202ENST00000358771 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
SIRPA-202ENST00000358771 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
SIRPA-202ENST00000358771 NBPF14Q5TI25 921 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
SIRPA-202ENST00000358771 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 ZFYP08048 801 aaPredicted RBP16.64■□□□□ 0.25
SIRPA-202ENST00000358771 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
SIRPA-202ENST00000358771 ANO6Q4KMQ2 910 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
SIRPA-202ENST00000358771 GPAA1O43292 621 aa16.63■□□□□ 0.25
SIRPA-202ENST00000358771 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
SIRPA-202ENST00000358771 HAUS7Q99871 368 aa16.63■□□□□ 0.25
SIRPA-202ENST00000358771 ZNF652Q9Y2D9 606 aa16.63■□□□□ 0.25
SIRPA-202ENST00000358771 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
SIRPA-202ENST00000358771 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms