RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RTEL1-TNFRSF6BF6WH68 1400 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 SH3BGRP55822 239 aaPredicted RBP9.96□□□□□ -0.82
COL6A6-201ENST00000358511 PPFIA1Q13136 1202 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 SPATS2Q86XZ4 545 aaKnown RBP9.96□□□□□ -0.82
COL6A6-201ENST00000358511 CACNA2D3Q8IZS8 1091 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 PPP1R14CQ8TAE6 165 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 PPP1R9BQ96SB3 815 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
COL6A6-201ENST00000358511 IQCGQ9H095 443 aaKnown RBP9.96□□□□□ -0.82
COL6A6-201ENST00000358511 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 TCP11L1Q9NUJ3 509 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 EXOC1Q9NV70 894 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 GOLGA6BA6NDN3 693 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 DISP3Q9P2K9 1392 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 ZNF213O14771 459 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 TCHHQ07283 1943 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 CTNNA2P26232 953 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 TRIM7Q9C029 511 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 ZBTB16Q05516 673 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 HOMER2Q9NSB8 354 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 NLRP2Q9NX02 1062 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 KDM2BQ8NHM5 1336 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 METAP2P50579 478 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 SELENOSQ9BQE4 189 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 CCDC77Q9BR77 488 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 SEC24BO95487 1268 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 ZNF75DP51815 510 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 C17orf53Q8N3J3 647 aaPredicted RBP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 RNF41Q9H4P4 317 aaPredicted RBP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 CALML4Q96GE6 196 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 PUS7Q96PZ0 661 aaKnown RBP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 CCDC40Q4G0X9 1142 aa9.95□□□□□ -0.82
COL6A6-201ENST00000358511 RNF168Q8IYW5 571 aaPredicted RBP9.95□□□□□ -0.82
COL6A6-201ENST00000358511 PDE1AP54750 535 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 CFAP58Q5T655 872 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 NAPGQ99747 312 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 ORC3Q9UBD5 711 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 CATIPQ7Z7H3 387 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 GRIN2BQ13224 1484 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 NOL3O60936 208 aaKnown RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 TSHZ3Q63HK5 1081 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 IARSP41252 1262 aaKnown RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 ZNF530Q6P9A1 599 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 THUMPD2Q9BTF0 503 aaKnown RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 VCXQ9H320 206 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 ALDH3A1P30838 453 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 TNNC1P63316 161 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 KARSQ15046 597 aaKnown RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 GOLGA8AA7E2F4 631 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 AKR1B15C9JRZ8 316 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 ATP5DP30049 168 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 STRN4Q9NRL3 753 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 LRP2BPQ9P2M1 347 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 ATP2B2Q01814 1243 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 HSP90AA4PQ58FG1 418 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 NUTM2AQ8IVF1 878 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 RAD50Q92878 1312 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 HPDP32754 393 aaPredicted RBP9.94□□□□□ -0.82
COL6A6-201ENST00000358511 AP1ARQ63HQ0 302 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 IQCA1Q86XH1 822 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 IFT81Q8WYA0 676 aa9.94□□□□□ -0.82
COL6A6-201ENST00000358511 SPTLC2O15270 562 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 GCKP35557 465 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 MCM10Q7L590 875 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 NUTM2GQ5VZR2 741 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 MICU3Q86XE3 530 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 LMBR1Q8WVP7 490 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 RRS1Q15050 365 aaKnown RBP9.93□□□□□ -0.82
COL6A6-201ENST00000358511 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
COL6A6-201ENST00000358511 TTF2Q9UNY4 1162 aaKnown RBP9.93□□□□□ -0.82
COL6A6-201ENST00000358511 UBA7P41226 1012 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 PIK3R4Q99570 1358 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 IBTKQ9P2D0 1353 aaPredicted RBP9.93□□□□□ -0.82
COL6A6-201ENST00000358511 PSMA7O14818 248 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 STAT6P42226 847 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 UBXN1Q04323 297 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 MED4Q9NPJ6 270 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 BRD3Q15059 726 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 INTS8Q75QN2 995 aaKnown RBP9.93□□□□□ -0.82
COL6A6-201ENST00000358511 NECAB1Q8N987 351 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 ANKRD24Q8TF21 1146 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 TBC1D5Q92609 795 aa9.93□□□□□ -0.82
COL6A6-201ENST00000358511 FLIIQ13045 1269 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 RPAINQ86UA6 219 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 SLC8A1P32418 973 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 RBBP5Q15291 538 aaKnown RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 BRAPQ7Z569 592 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 TRIM14Q14142 442 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 LRRC27Q9C0I9 530 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 FERP16591 822 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms