RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 VTI1AQ96AJ9 217 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 CCDC77Q9BR77 488 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 STMN4Q9H169 189 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-202ENST00000358392 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-202ENST00000358392 CEP120Q8N960 986 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 EBAG9O00559 213 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-202ENST00000358392 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-202ENST00000358392 MCM5P33992 734 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 UBXN1Q04323 297 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 PDE4BQ07343 736 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 NBPF11Q86T75 865 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 GRM1Q13255 1194 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 TXNDC16Q9P2K2 825 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 ASIC1P78348 528 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 GBP6Q6ZN66 633 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 TRIM7Q9C029 511 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 GEN1Q17RS7 908 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 CTAGE1Q96RT6 745 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 PFDN4Q9NQP4 134 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 VIMP08670 466 aaKnown RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 RASA3Q14644 834 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 PSMD6Q15008 389 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 IFIT1BQ5T764 474 aaKnown RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 FAM114A2Q9NRY5 505 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 RSRC1Q96IZ7 334 aaKnown RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 SAMD15Q9P1V8 674 aa12.69□□□□□ -0.38
COL11A1-202ENST00000358392 RNASE9P60153 205 aaKnown RBP12.69□□□□□ -0.38
COL11A1-202ENST00000358392 FAM13AO94988 1023 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 PPP1R21Q6ZMI0 780 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 STMN2Q93045 179 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 TMX3Q96JJ7 454 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 SATB1Q01826 763 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 WTAPQ15007 396 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 TTC14Q96N46 770 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 IQSEC3Q9UPP2 1182 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-202ENST00000358392 KIF3CO14782 793 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 SLU7O95391 586 aaKnown RBP12.68□□□□□ -0.38
COL11A1-202ENST00000358392 CHST3Q7LGC8 479 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 WDHD1O75717 1129 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-202ENST00000358392 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
COL11A1-202ENST00000358392 FAM169AQ9Y6X4 670 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 FAM170AA1A519 330 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 CRCPO75575 148 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 STIM2Q9P246 746 aa12.68□□□□□ -0.38
COL11A1-202ENST00000358392 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 BRF1Q92994 677 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 PICALMQ13492 652 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 SNX16P57768 344 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 SETDB1Q15047 1291 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 Q6ZUG5 572 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 KIF21BO75037 1637 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 CIB2O75838 187 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
COL11A1-202ENST00000358392 PYM1Q9BRP8 204 aaKnown RBP12.67□□□□□ -0.38
COL11A1-202ENST00000358392 DACT1Q9NYF0 836 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
COL11A1-202ENST00000358392 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 LRRC27Q9C0I9 530 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
COL11A1-202ENST00000358392 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 ATP11AP98196 1134 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 LDHAL6AQ6ZMR3 332 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 FAM76AQ8TAV0 307 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
COL11A1-202ENST00000358392 HSPA1LP34931 641 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 KLHL40Q2TBA0 621 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 IGHDP01880 384 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 ZFYP08048 801 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-202ENST00000358392 TRIM27P14373 513 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 PCK1P35558 622 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms