RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 CNBD1Q8NA66 436 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 LDHBP07195 334 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 PLBD2Q8NHP8 589 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 RBM8AQ9Y5S9 174 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 NPC1L1Q9UHC9 1359 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 STX1AQ16623 288 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 TMEM87AQ8NBN3 555 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 RNF113AO15541 343 aaKnown RBP11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 SYCP3Q8IZU3 236 aa11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 TNNI2P48788 182 aa11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 RMND1Q9NWS8 449 aa11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 DENND2AQ9ULE3 1009 aa11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
SPTAN1-201ENST00000358161 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 VEZTQ9HBM0 779 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 MTIF2P46199 727 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 CCDC102BQ68D86 513 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 MAGEB6Q8N7X4 407 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 SLAIN2Q9P270 581 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 CAVIN2O95810 425 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 BRF1Q92994 677 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 ORAI2Q96SN7 254 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 YEATS4O95619 227 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 USO1O60763 962 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 HEATR3Q7Z4Q2 680 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 IDEP14735 1019 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
SPTAN1-201ENST00000358161 KIF5CO60282 957 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 PA2G4Q9UQ80 394 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 UBE2HP62256 183 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 EXOC1Q9NV70 894 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 LIG1P18858 919 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 CALML3P27482 149 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 SLC52A2Q9HAB3 445 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 SSFA2P28290 1259 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 TFCP2Q12800 502 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 MCM9Q9NXL9 1143 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 CHD1O14646 1710 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 IL13P35225 146 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 USP37Q86T82 979 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 KCNG4Q8TDN1 519 aa11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-201ENST00000358161 NMIQ13287 307 aaPredicted RBP11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 DCTPP1Q9H773 170 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 NAPAP54920 295 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 Q6ZUG5 572 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 CERS3Q8IU89 383 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 C6orf50Q9HD87 102 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 RAD50Q92878 1312 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 SH3TC1Q8TE82 1336 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 DRC1Q96MC2 740 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 H0YHG0 523 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 RAB11FIP4Q86YS3 637 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-201ENST00000358161 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 PDE8AO60658 829 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 ENOX2Q16206 610 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 BICD1Q96G01 975 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 CCDC174Q6PII3 467 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 SPDYE3A6NKU9 549 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 PRC1O43663 620 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 NEMFO60524 1076 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 GSDMDP57764 484 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 TDRD12Q587J7 1177 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 CLIP2Q9UDT6 1046 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 STAT6P42226 847 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 PUM3Q15397 648 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 TMX3Q96JJ7 454 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 USP21Q9UK80 565 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 MAST3O60307 1309 aa11.84□□□□□ -0.51
SPTAN1-201ENST00000358161 CCDC172P0C7W6 258 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms